Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19618 | 59077;59078;59079 | chr2:178593356;178593355;178593354 | chr2:179458083;179458082;179458081 |
N2AB | 17977 | 54154;54155;54156 | chr2:178593356;178593355;178593354 | chr2:179458083;179458082;179458081 |
N2A | 17050 | 51373;51374;51375 | chr2:178593356;178593355;178593354 | chr2:179458083;179458082;179458081 |
N2B | 10553 | 31882;31883;31884 | chr2:178593356;178593355;178593354 | chr2:179458083;179458082;179458081 |
Novex-1 | 10678 | 32257;32258;32259 | chr2:178593356;178593355;178593354 | chr2:179458083;179458082;179458081 |
Novex-2 | 10745 | 32458;32459;32460 | chr2:178593356;178593355;178593354 | chr2:179458083;179458082;179458081 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | None | N | 0.143 | 0.125 | 0.243398259712 | gnomAD-4.0.0 | 1.36874E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79923E-06 | 0 | 0 |
R/T | None | None | 0.324 | N | 0.513 | 0.338 | 0.314716216878 | gnomAD-4.0.0 | 1.36874E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79923E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.945 | likely_pathogenic | 0.9513 | pathogenic | -2.104 | Highly Destabilizing | 0.116 | N | 0.414 | neutral | None | None | None | None | N |
R/C | 0.5636 | ambiguous | 0.5669 | pathogenic | -2.002 | Highly Destabilizing | 0.981 | D | 0.603 | neutral | None | None | None | None | N |
R/D | 0.993 | likely_pathogenic | 0.9938 | pathogenic | -1.075 | Destabilizing | 0.388 | N | 0.547 | neutral | None | None | None | None | N |
R/E | 0.9205 | likely_pathogenic | 0.9271 | pathogenic | -0.864 | Destabilizing | 0.116 | N | 0.431 | neutral | None | None | None | None | N |
R/F | 0.9663 | likely_pathogenic | 0.9714 | pathogenic | -1.381 | Destabilizing | 0.932 | D | 0.623 | neutral | None | None | None | None | N |
R/G | 0.918 | likely_pathogenic | 0.9205 | pathogenic | -2.428 | Highly Destabilizing | 0.324 | N | 0.541 | neutral | N | 0.483462786 | None | None | N |
R/H | 0.418 | ambiguous | 0.4218 | ambiguous | -2.305 | Highly Destabilizing | 0.818 | D | 0.529 | neutral | None | None | None | None | N |
R/I | 0.9109 | likely_pathogenic | 0.9149 | pathogenic | -1.16 | Destabilizing | 0.773 | D | 0.629 | neutral | N | 0.503782314 | None | None | N |
R/K | 0.1399 | likely_benign | 0.1398 | benign | -1.364 | Destabilizing | None | N | 0.143 | neutral | N | 0.388783908 | None | None | N |
R/L | 0.8322 | likely_pathogenic | 0.8451 | pathogenic | -1.16 | Destabilizing | 0.388 | N | 0.541 | neutral | None | None | None | None | N |
R/M | 0.8194 | likely_pathogenic | 0.8254 | pathogenic | -1.652 | Destabilizing | 0.932 | D | 0.541 | neutral | None | None | None | None | N |
R/N | 0.9749 | likely_pathogenic | 0.9769 | pathogenic | -1.33 | Destabilizing | 0.388 | N | 0.492 | neutral | None | None | None | None | N |
R/P | 0.9976 | likely_pathogenic | 0.9975 | pathogenic | -1.465 | Destabilizing | 0.563 | D | 0.606 | neutral | None | None | None | None | N |
R/Q | 0.3774 | ambiguous | 0.3809 | ambiguous | -1.207 | Destabilizing | 0.241 | N | 0.494 | neutral | None | None | None | None | N |
R/S | 0.9795 | likely_pathogenic | 0.981 | pathogenic | -2.228 | Highly Destabilizing | 0.09 | N | 0.485 | neutral | N | 0.51465185 | None | None | N |
R/T | 0.9424 | likely_pathogenic | 0.948 | pathogenic | -1.811 | Destabilizing | 0.324 | N | 0.513 | neutral | N | 0.496945459 | None | None | N |
R/V | 0.9249 | likely_pathogenic | 0.93 | pathogenic | -1.465 | Destabilizing | 0.388 | N | 0.579 | neutral | None | None | None | None | N |
R/W | 0.7845 | likely_pathogenic | 0.7774 | pathogenic | -0.923 | Destabilizing | 0.981 | D | 0.635 | neutral | None | None | None | None | N |
R/Y | 0.9073 | likely_pathogenic | 0.9141 | pathogenic | -0.778 | Destabilizing | 0.932 | D | 0.604 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.