Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19621 | 59086;59087;59088 | chr2:178593347;178593346;178593345 | chr2:179458074;179458073;179458072 |
N2AB | 17980 | 54163;54164;54165 | chr2:178593347;178593346;178593345 | chr2:179458074;179458073;179458072 |
N2A | 17053 | 51382;51383;51384 | chr2:178593347;178593346;178593345 | chr2:179458074;179458073;179458072 |
N2B | 10556 | 31891;31892;31893 | chr2:178593347;178593346;178593345 | chr2:179458074;179458073;179458072 |
Novex-1 | 10681 | 32266;32267;32268 | chr2:178593347;178593346;178593345 | chr2:179458074;179458073;179458072 |
Novex-2 | 10748 | 32467;32468;32469 | chr2:178593347;178593346;178593345 | chr2:179458074;179458073;179458072 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | None | None | 0.324 | N | 0.345 | 0.136 | 0.528761452848 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
M/V | None | None | 0.165 | N | 0.361 | 0.175 | 0.495773158881 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85966E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.2202 | likely_benign | 0.1975 | benign | -0.154 | Destabilizing | 0.116 | N | 0.342 | neutral | None | None | None | None | N |
M/C | 0.6358 | likely_pathogenic | 0.613 | pathogenic | -0.403 | Destabilizing | 0.981 | D | 0.267 | neutral | None | None | None | None | N |
M/D | 0.5708 | likely_pathogenic | 0.5525 | ambiguous | 0.392 | Stabilizing | 0.388 | N | 0.355 | neutral | None | None | None | None | N |
M/E | 0.3563 | ambiguous | 0.3394 | benign | 0.323 | Stabilizing | 0.241 | N | 0.337 | neutral | None | None | None | None | N |
M/F | 0.3697 | ambiguous | 0.3419 | ambiguous | -0.214 | Destabilizing | 0.818 | D | 0.259 | neutral | None | None | None | None | N |
M/G | 0.3362 | likely_benign | 0.3041 | benign | -0.222 | Destabilizing | 0.388 | N | 0.373 | neutral | None | None | None | None | N |
M/H | 0.3666 | ambiguous | 0.3052 | benign | 0.366 | Stabilizing | 0.818 | D | 0.275 | neutral | None | None | None | None | N |
M/I | 0.4339 | ambiguous | 0.3935 | ambiguous | -0.075 | Destabilizing | 0.492 | N | 0.325 | neutral | N | 0.470322282 | None | None | N |
M/K | 0.133 | likely_benign | 0.0973 | benign | 0.436 | Stabilizing | 0.001 | N | 0.171 | neutral | N | 0.369445999 | None | None | N |
M/L | 0.1307 | likely_benign | 0.117 | benign | -0.075 | Destabilizing | 0.079 | N | 0.253 | neutral | N | 0.413602208 | None | None | N |
M/N | 0.2759 | likely_benign | 0.2514 | benign | 0.557 | Stabilizing | 0.388 | N | 0.344 | neutral | None | None | None | None | N |
M/P | 0.7588 | likely_pathogenic | 0.7233 | pathogenic | -0.08 | Destabilizing | 0.818 | D | 0.337 | neutral | None | None | None | None | N |
M/Q | 0.1664 | likely_benign | 0.1394 | benign | 0.409 | Stabilizing | 0.241 | N | 0.291 | neutral | None | None | None | None | N |
M/R | 0.1826 | likely_benign | 0.135 | benign | 0.821 | Stabilizing | 0.001 | N | 0.267 | neutral | N | 0.40455865 | None | None | N |
M/S | 0.2213 | likely_benign | 0.1969 | benign | 0.164 | Stabilizing | 0.241 | N | 0.321 | neutral | None | None | None | None | N |
M/T | 0.137 | likely_benign | 0.1194 | benign | 0.179 | Stabilizing | 0.324 | N | 0.345 | neutral | N | 0.396208526 | None | None | N |
M/V | 0.0998 | likely_benign | 0.0893 | benign | -0.08 | Destabilizing | 0.165 | N | 0.361 | neutral | N | 0.42939838 | None | None | N |
M/W | 0.6479 | likely_pathogenic | 0.6115 | pathogenic | -0.239 | Destabilizing | 0.981 | D | 0.297 | neutral | None | None | None | None | N |
M/Y | 0.4883 | ambiguous | 0.4556 | ambiguous | -0.026 | Destabilizing | 0.818 | D | 0.281 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.