Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19628 | 59107;59108;59109 | chr2:178593326;178593325;178593324 | chr2:179458053;179458052;179458051 |
N2AB | 17987 | 54184;54185;54186 | chr2:178593326;178593325;178593324 | chr2:179458053;179458052;179458051 |
N2A | 17060 | 51403;51404;51405 | chr2:178593326;178593325;178593324 | chr2:179458053;179458052;179458051 |
N2B | 10563 | 31912;31913;31914 | chr2:178593326;178593325;178593324 | chr2:179458053;179458052;179458051 |
Novex-1 | 10688 | 32287;32288;32289 | chr2:178593326;178593325;178593324 | chr2:179458053;179458052;179458051 |
Novex-2 | 10755 | 32488;32489;32490 | chr2:178593326;178593325;178593324 | chr2:179458053;179458052;179458051 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.005 | N | 0.163 | 0.148 | 0.378674557249 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | rs772550095 | -0.343 | 0.625 | N | 0.507 | 0.221 | 0.413761986042 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.30736E-04 | None | 0 | 0 | 0 |
V/I | rs772550095 | -0.343 | 0.625 | N | 0.507 | 0.221 | 0.413761986042 | gnomAD-4.0.0 | 6.15913E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.0436E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2513 | likely_benign | 0.2763 | benign | -1.419 | Destabilizing | 0.005 | N | 0.163 | neutral | N | 0.463916385 | None | None | I |
V/C | 0.7482 | likely_pathogenic | 0.7785 | pathogenic | -1.03 | Destabilizing | 0.998 | D | 0.527 | neutral | None | None | None | None | I |
V/D | 0.9601 | likely_pathogenic | 0.9589 | pathogenic | -1.381 | Destabilizing | 0.966 | D | 0.593 | neutral | N | 0.51007251 | None | None | I |
V/E | 0.9133 | likely_pathogenic | 0.9123 | pathogenic | -1.243 | Destabilizing | 0.842 | D | 0.546 | neutral | None | None | None | None | I |
V/F | 0.704 | likely_pathogenic | 0.6737 | pathogenic | -0.831 | Destabilizing | 0.966 | D | 0.535 | neutral | N | 0.479558311 | None | None | I |
V/G | 0.5863 | likely_pathogenic | 0.6159 | pathogenic | -1.854 | Destabilizing | 0.669 | D | 0.575 | neutral | N | 0.492386329 | None | None | I |
V/H | 0.9693 | likely_pathogenic | 0.969 | pathogenic | -1.431 | Destabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | I |
V/I | 0.1284 | likely_benign | 0.1186 | benign | -0.267 | Destabilizing | 0.625 | D | 0.507 | neutral | N | 0.467152049 | None | None | I |
V/K | 0.9605 | likely_pathogenic | 0.9604 | pathogenic | -1.225 | Destabilizing | 0.842 | D | 0.541 | neutral | None | None | None | None | I |
V/L | 0.595 | likely_pathogenic | 0.5639 | ambiguous | -0.267 | Destabilizing | 0.625 | D | 0.448 | neutral | N | 0.47122636 | None | None | I |
V/M | 0.5258 | ambiguous | 0.4762 | ambiguous | -0.342 | Destabilizing | 0.991 | D | 0.484 | neutral | None | None | None | None | I |
V/N | 0.8683 | likely_pathogenic | 0.8749 | pathogenic | -1.363 | Destabilizing | 0.974 | D | 0.602 | neutral | None | None | None | None | I |
V/P | 0.9302 | likely_pathogenic | 0.9373 | pathogenic | -0.618 | Destabilizing | 0.974 | D | 0.585 | neutral | None | None | None | None | I |
V/Q | 0.9062 | likely_pathogenic | 0.9137 | pathogenic | -1.284 | Destabilizing | 0.974 | D | 0.601 | neutral | None | None | None | None | I |
V/R | 0.9422 | likely_pathogenic | 0.9448 | pathogenic | -1.014 | Destabilizing | 0.974 | D | 0.611 | neutral | None | None | None | None | I |
V/S | 0.5638 | ambiguous | 0.5992 | pathogenic | -1.946 | Destabilizing | 0.728 | D | 0.544 | neutral | None | None | None | None | I |
V/T | 0.509 | ambiguous | 0.5304 | ambiguous | -1.664 | Destabilizing | 0.029 | N | 0.161 | neutral | None | None | None | None | I |
V/W | 0.9912 | likely_pathogenic | 0.9902 | pathogenic | -1.188 | Destabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | I |
V/Y | 0.9408 | likely_pathogenic | 0.94 | pathogenic | -0.785 | Destabilizing | 0.991 | D | 0.545 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.