Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19629 | 59110;59111;59112 | chr2:178593323;178593322;178593321 | chr2:179458050;179458049;179458048 |
N2AB | 17988 | 54187;54188;54189 | chr2:178593323;178593322;178593321 | chr2:179458050;179458049;179458048 |
N2A | 17061 | 51406;51407;51408 | chr2:178593323;178593322;178593321 | chr2:179458050;179458049;179458048 |
N2B | 10564 | 31915;31916;31917 | chr2:178593323;178593322;178593321 | chr2:179458050;179458049;179458048 |
Novex-1 | 10689 | 32290;32291;32292 | chr2:178593323;178593322;178593321 | chr2:179458050;179458049;179458048 |
Novex-2 | 10756 | 32491;32492;32493 | chr2:178593323;178593322;178593321 | chr2:179458050;179458049;179458048 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | N | 0.147 | 0.093 | 0.12205267543 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
T/S | rs1417896313 | -1.174 | 0.001 | N | 0.151 | 0.099 | 0.115124310173 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
T/S | rs1417896313 | -1.174 | 0.001 | N | 0.151 | 0.099 | 0.115124310173 | gnomAD-4.0.0 | 1.3687E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79923E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1633 | likely_benign | 0.1536 | benign | -0.804 | Destabilizing | None | N | 0.147 | neutral | N | 0.47650168 | None | None | N |
T/C | 0.4403 | ambiguous | 0.4298 | ambiguous | -0.547 | Destabilizing | 0.667 | D | 0.427 | neutral | None | None | None | None | N |
T/D | 0.6884 | likely_pathogenic | 0.6592 | pathogenic | 0.044 | Stabilizing | 0.22 | N | 0.381 | neutral | None | None | None | None | N |
T/E | 0.7255 | likely_pathogenic | 0.6829 | pathogenic | 0.085 | Stabilizing | 0.055 | N | 0.374 | neutral | None | None | None | None | N |
T/F | 0.6218 | likely_pathogenic | 0.6104 | pathogenic | -0.984 | Destabilizing | 0.497 | N | 0.44 | neutral | None | None | None | None | N |
T/G | 0.2748 | likely_benign | 0.2657 | benign | -1.062 | Destabilizing | None | N | 0.303 | neutral | None | None | None | None | N |
T/H | 0.4936 | ambiguous | 0.4756 | ambiguous | -1.181 | Destabilizing | 0.667 | D | 0.44 | neutral | None | None | None | None | N |
T/I | 0.5011 | ambiguous | 0.4972 | ambiguous | -0.204 | Destabilizing | 0.096 | N | 0.373 | neutral | N | 0.513961203 | None | None | N |
T/K | 0.6236 | likely_pathogenic | 0.5682 | pathogenic | -0.471 | Destabilizing | 0.055 | N | 0.367 | neutral | None | None | None | None | N |
T/L | 0.2557 | likely_benign | 0.2428 | benign | -0.204 | Destabilizing | 0.001 | N | 0.239 | neutral | None | None | None | None | N |
T/M | 0.1946 | likely_benign | 0.1781 | benign | -0.239 | Destabilizing | 0.497 | N | 0.452 | neutral | None | None | None | None | N |
T/N | 0.1574 | likely_benign | 0.1569 | benign | -0.578 | Destabilizing | 0.096 | N | 0.353 | neutral | N | 0.399462262 | None | None | N |
T/P | 0.6798 | likely_pathogenic | 0.6235 | pathogenic | -0.373 | Destabilizing | 0.301 | N | 0.441 | neutral | N | 0.470233603 | None | None | N |
T/Q | 0.4857 | ambiguous | 0.4524 | ambiguous | -0.573 | Destabilizing | 0.011 | N | 0.261 | neutral | None | None | None | None | N |
T/R | 0.5472 | ambiguous | 0.4903 | ambiguous | -0.358 | Destabilizing | 0.001 | N | 0.263 | neutral | None | None | None | None | N |
T/S | 0.1132 | likely_benign | 0.1173 | benign | -0.87 | Destabilizing | 0.001 | N | 0.151 | neutral | N | 0.444175831 | None | None | N |
T/V | 0.3397 | likely_benign | 0.3399 | benign | -0.373 | Destabilizing | 0.004 | N | 0.165 | neutral | None | None | None | None | N |
T/W | 0.8499 | likely_pathogenic | 0.8348 | pathogenic | -0.998 | Destabilizing | 0.958 | D | 0.453 | neutral | None | None | None | None | N |
T/Y | 0.6323 | likely_pathogenic | 0.6222 | pathogenic | -0.702 | Destabilizing | 0.667 | D | 0.44 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.