Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19635 | 59128;59129;59130 | chr2:178593305;178593304;178593303 | chr2:179458032;179458031;179458030 |
N2AB | 17994 | 54205;54206;54207 | chr2:178593305;178593304;178593303 | chr2:179458032;179458031;179458030 |
N2A | 17067 | 51424;51425;51426 | chr2:178593305;178593304;178593303 | chr2:179458032;179458031;179458030 |
N2B | 10570 | 31933;31934;31935 | chr2:178593305;178593304;178593303 | chr2:179458032;179458031;179458030 |
Novex-1 | 10695 | 32308;32309;32310 | chr2:178593305;178593304;178593303 | chr2:179458032;179458031;179458030 |
Novex-2 | 10762 | 32509;32510;32511 | chr2:178593305;178593304;178593303 | chr2:179458032;179458031;179458030 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 1.0 | N | 0.811 | 0.41 | 0.459192005304 | gnomAD-4.0.0 | 1.59202E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1945 | likely_benign | 0.1681 | benign | -0.643 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.48486766 | None | None | N |
P/C | 0.657 | likely_pathogenic | 0.615 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
P/D | 0.5345 | ambiguous | 0.5124 | ambiguous | -0.751 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
P/E | 0.3574 | ambiguous | 0.344 | ambiguous | -0.813 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
P/F | 0.7994 | likely_pathogenic | 0.7605 | pathogenic | -0.732 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
P/G | 0.3708 | ambiguous | 0.3498 | ambiguous | -0.81 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
P/H | 0.4178 | ambiguous | 0.3688 | ambiguous | -0.288 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
P/I | 0.5559 | ambiguous | 0.5232 | ambiguous | -0.32 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
P/K | 0.4637 | ambiguous | 0.4283 | ambiguous | -0.58 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
P/L | 0.3375 | likely_benign | 0.2933 | benign | -0.32 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.472850042 | None | None | N |
P/M | 0.5811 | likely_pathogenic | 0.5508 | ambiguous | -0.509 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
P/N | 0.4504 | ambiguous | 0.4195 | ambiguous | -0.351 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/Q | 0.308 | likely_benign | 0.2755 | benign | -0.552 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.486657172 | None | None | N |
P/R | 0.344 | ambiguous | 0.2989 | benign | -0.081 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.468359413 | None | None | N |
P/S | 0.2692 | likely_benign | 0.2379 | benign | -0.65 | Destabilizing | 1.0 | D | 0.809 | deleterious | N | 0.489022686 | None | None | N |
P/T | 0.2261 | likely_benign | 0.1995 | benign | -0.617 | Destabilizing | 1.0 | D | 0.809 | deleterious | N | 0.456947553 | None | None | N |
P/V | 0.4054 | ambiguous | 0.374 | ambiguous | -0.396 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
P/W | 0.8531 | likely_pathogenic | 0.8246 | pathogenic | -0.853 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
P/Y | 0.6536 | likely_pathogenic | 0.6177 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.