Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19636 | 59131;59132;59133 | chr2:178593302;178593301;178593300 | chr2:179458029;179458028;179458027 |
N2AB | 17995 | 54208;54209;54210 | chr2:178593302;178593301;178593300 | chr2:179458029;179458028;179458027 |
N2A | 17068 | 51427;51428;51429 | chr2:178593302;178593301;178593300 | chr2:179458029;179458028;179458027 |
N2B | 10571 | 31936;31937;31938 | chr2:178593302;178593301;178593300 | chr2:179458029;179458028;179458027 |
Novex-1 | 10696 | 32311;32312;32313 | chr2:178593302;178593301;178593300 | chr2:179458029;179458028;179458027 |
Novex-2 | 10763 | 32512;32513;32514 | chr2:178593302;178593301;178593300 | chr2:179458029;179458028;179458027 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.873 | N | 0.563 | 0.224 | 0.462374447365 | gnomAD-4.0.0 | 1.592E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85964E-06 | 0 | 0 |
Y/H | None | None | 0.001 | N | 0.227 | 0.089 | 0.149567049428 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31253E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.1378 | likely_benign | 0.1734 | benign | -1.081 | Destabilizing | 0.036 | N | 0.297 | neutral | None | None | None | None | N |
Y/C | 0.0898 | likely_benign | 0.0923 | benign | -0.169 | Destabilizing | 0.873 | D | 0.563 | neutral | N | 0.45327253 | None | None | N |
Y/D | 0.0917 | likely_benign | 0.1062 | benign | 0.127 | Stabilizing | None | N | 0.378 | neutral | N | 0.32367085 | None | None | N |
Y/E | 0.2184 | likely_benign | 0.277 | benign | 0.143 | Stabilizing | 0.036 | N | 0.293 | neutral | None | None | None | None | N |
Y/F | 0.0756 | likely_benign | 0.0816 | benign | -0.447 | Destabilizing | 0.391 | N | 0.431 | neutral | N | 0.443863613 | None | None | N |
Y/G | 0.1594 | likely_benign | 0.1791 | benign | -1.312 | Destabilizing | None | N | 0.391 | neutral | None | None | None | None | N |
Y/H | 0.0963 | likely_benign | 0.1084 | benign | -0.146 | Destabilizing | 0.001 | N | 0.227 | neutral | N | 0.421680187 | None | None | N |
Y/I | 0.2312 | likely_benign | 0.2789 | benign | -0.446 | Destabilizing | 0.46 | N | 0.46 | neutral | None | None | None | None | N |
Y/K | 0.2968 | likely_benign | 0.3468 | ambiguous | -0.355 | Destabilizing | 0.001 | N | 0.302 | neutral | None | None | None | None | N |
Y/L | 0.2079 | likely_benign | 0.2528 | benign | -0.446 | Destabilizing | 0.148 | N | 0.303 | neutral | None | None | None | None | N |
Y/M | 0.3061 | likely_benign | 0.3737 | ambiguous | -0.352 | Destabilizing | 0.901 | D | 0.495 | neutral | None | None | None | None | N |
Y/N | 0.0608 | likely_benign | 0.0747 | benign | -0.648 | Destabilizing | 0.002 | N | 0.319 | neutral | N | 0.369904572 | None | None | N |
Y/P | 0.4381 | ambiguous | 0.4856 | ambiguous | -0.643 | Destabilizing | 0.46 | N | 0.473 | neutral | None | None | None | None | N |
Y/Q | 0.1828 | likely_benign | 0.2312 | benign | -0.561 | Destabilizing | 0.148 | N | 0.395 | neutral | None | None | None | None | N |
Y/R | 0.2279 | likely_benign | 0.2621 | benign | -0.098 | Destabilizing | 0.08 | N | 0.385 | neutral | None | None | None | None | N |
Y/S | 0.0728 | likely_benign | 0.0859 | benign | -0.985 | Destabilizing | 0.002 | N | 0.331 | neutral | N | 0.352145531 | None | None | N |
Y/T | 0.1473 | likely_benign | 0.1849 | benign | -0.877 | Destabilizing | 0.08 | N | 0.274 | neutral | None | None | None | None | N |
Y/V | 0.1645 | likely_benign | 0.192 | benign | -0.643 | Destabilizing | 0.148 | N | 0.371 | neutral | None | None | None | None | N |
Y/W | 0.3554 | ambiguous | 0.3651 | ambiguous | -0.454 | Destabilizing | 0.901 | D | 0.489 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.