Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19641 | 59146;59147;59148 | chr2:178593287;178593286;178593285 | chr2:179458014;179458013;179458012 |
N2AB | 18000 | 54223;54224;54225 | chr2:178593287;178593286;178593285 | chr2:179458014;179458013;179458012 |
N2A | 17073 | 51442;51443;51444 | chr2:178593287;178593286;178593285 | chr2:179458014;179458013;179458012 |
N2B | 10576 | 31951;31952;31953 | chr2:178593287;178593286;178593285 | chr2:179458014;179458013;179458012 |
Novex-1 | 10701 | 32326;32327;32328 | chr2:178593287;178593286;178593285 | chr2:179458014;179458013;179458012 |
Novex-2 | 10768 | 32527;32528;32529 | chr2:178593287;178593286;178593285 | chr2:179458014;179458013;179458012 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.892 | N | 0.659 | 0.332 | 0.628610474668 | gnomAD-4.0.0 | 1.20036E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31254E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6684 | likely_pathogenic | 0.677 | pathogenic | -1.882 | Destabilizing | 0.892 | D | 0.659 | neutral | N | 0.479809618 | None | None | N |
V/C | 0.8822 | likely_pathogenic | 0.8989 | pathogenic | -1.439 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
V/D | 0.9895 | likely_pathogenic | 0.9891 | pathogenic | -2.892 | Highly Destabilizing | 0.994 | D | 0.871 | deleterious | D | 0.528197354 | None | None | N |
V/E | 0.9724 | likely_pathogenic | 0.9714 | pathogenic | -2.584 | Highly Destabilizing | 0.996 | D | 0.868 | deleterious | None | None | None | None | N |
V/F | 0.8133 | likely_pathogenic | 0.8073 | pathogenic | -1.081 | Destabilizing | 0.056 | N | 0.559 | neutral | N | 0.504582462 | None | None | N |
V/G | 0.8706 | likely_pathogenic | 0.8808 | pathogenic | -2.491 | Highly Destabilizing | 0.983 | D | 0.867 | deleterious | D | 0.551835017 | None | None | N |
V/H | 0.9906 | likely_pathogenic | 0.9906 | pathogenic | -2.482 | Highly Destabilizing | 0.999 | D | 0.89 | deleterious | None | None | None | None | N |
V/I | 0.121 | likely_benign | 0.1101 | benign | -0.134 | Destabilizing | 0.63 | D | 0.549 | neutral | N | 0.496530236 | None | None | N |
V/K | 0.9857 | likely_pathogenic | 0.9856 | pathogenic | -1.626 | Destabilizing | 0.987 | D | 0.863 | deleterious | None | None | None | None | N |
V/L | 0.6453 | likely_pathogenic | 0.6203 | pathogenic | -0.134 | Destabilizing | 0.63 | D | 0.66 | neutral | N | 0.467859611 | None | None | N |
V/M | 0.669 | likely_pathogenic | 0.6369 | pathogenic | -0.32 | Destabilizing | 0.987 | D | 0.74 | deleterious | None | None | None | None | N |
V/N | 0.9659 | likely_pathogenic | 0.9672 | pathogenic | -2.251 | Highly Destabilizing | 0.996 | D | 0.891 | deleterious | None | None | None | None | N |
V/P | 0.9785 | likely_pathogenic | 0.9802 | pathogenic | -0.694 | Destabilizing | 0.996 | D | 0.865 | deleterious | None | None | None | None | N |
V/Q | 0.971 | likely_pathogenic | 0.9715 | pathogenic | -1.91 | Destabilizing | 0.996 | D | 0.897 | deleterious | None | None | None | None | N |
V/R | 0.9806 | likely_pathogenic | 0.9805 | pathogenic | -1.791 | Destabilizing | 0.996 | D | 0.9 | deleterious | None | None | None | None | N |
V/S | 0.8638 | likely_pathogenic | 0.8762 | pathogenic | -2.795 | Highly Destabilizing | 0.987 | D | 0.861 | deleterious | None | None | None | None | N |
V/T | 0.7987 | likely_pathogenic | 0.8096 | pathogenic | -2.315 | Highly Destabilizing | 0.957 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/W | 0.9961 | likely_pathogenic | 0.9958 | pathogenic | -1.685 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
V/Y | 0.9757 | likely_pathogenic | 0.9764 | pathogenic | -1.236 | Destabilizing | 0.95 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.