Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19645 | 59158;59159;59160 | chr2:178593275;178593274;178593273 | chr2:179458002;179458001;179458000 |
N2AB | 18004 | 54235;54236;54237 | chr2:178593275;178593274;178593273 | chr2:179458002;179458001;179458000 |
N2A | 17077 | 51454;51455;51456 | chr2:178593275;178593274;178593273 | chr2:179458002;179458001;179458000 |
N2B | 10580 | 31963;31964;31965 | chr2:178593275;178593274;178593273 | chr2:179458002;179458001;179458000 |
Novex-1 | 10705 | 32338;32339;32340 | chr2:178593275;178593274;178593273 | chr2:179458002;179458001;179458000 |
Novex-2 | 10772 | 32539;32540;32541 | chr2:178593275;178593274;178593273 | chr2:179458002;179458001;179458000 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.464 | N | 0.35 | 0.178 | 0.241664281697 | gnomAD-4.0.0 | 6.84357E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99611E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3729 | ambiguous | 0.368 | ambiguous | -1.025 | Destabilizing | 0.769 | D | 0.532 | neutral | None | None | None | None | N |
L/C | 0.7121 | likely_pathogenic | 0.6927 | pathogenic | -0.726 | Destabilizing | 0.994 | D | 0.659 | neutral | None | None | None | None | N |
L/D | 0.8592 | likely_pathogenic | 0.845 | pathogenic | -0.161 | Destabilizing | 0.979 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/E | 0.5679 | likely_pathogenic | 0.5302 | ambiguous | -0.194 | Destabilizing | 0.979 | D | 0.696 | prob.neutral | None | None | None | None | N |
L/F | 0.3173 | likely_benign | 0.2981 | benign | -0.731 | Destabilizing | 0.959 | D | 0.689 | prob.neutral | None | None | None | None | N |
L/G | 0.7329 | likely_pathogenic | 0.7262 | pathogenic | -1.276 | Destabilizing | 0.979 | D | 0.695 | prob.neutral | None | None | None | None | N |
L/H | 0.4361 | ambiguous | 0.4027 | ambiguous | -0.373 | Destabilizing | 0.998 | D | 0.67 | neutral | None | None | None | None | N |
L/I | 0.1258 | likely_benign | 0.1164 | benign | -0.446 | Destabilizing | 0.464 | N | 0.35 | neutral | N | 0.423955275 | None | None | N |
L/K | 0.4349 | ambiguous | 0.4012 | ambiguous | -0.513 | Destabilizing | 0.979 | D | 0.682 | prob.neutral | None | None | None | None | N |
L/M | 0.159 | likely_benign | 0.1477 | benign | -0.487 | Destabilizing | 0.959 | D | 0.666 | neutral | None | None | None | None | N |
L/N | 0.6028 | likely_pathogenic | 0.595 | pathogenic | -0.324 | Destabilizing | 0.993 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/P | 0.7328 | likely_pathogenic | 0.6952 | pathogenic | -0.606 | Destabilizing | 0.991 | D | 0.713 | prob.delet. | N | 0.504397571 | None | None | N |
L/Q | 0.2652 | likely_benign | 0.2359 | benign | -0.488 | Destabilizing | 0.991 | D | 0.701 | prob.neutral | N | 0.464588389 | None | None | N |
L/R | 0.3587 | ambiguous | 0.3326 | benign | 0.031 | Stabilizing | 0.973 | D | 0.706 | prob.neutral | N | 0.465164392 | None | None | N |
L/S | 0.5044 | ambiguous | 0.4894 | ambiguous | -0.921 | Destabilizing | 0.959 | D | 0.684 | prob.neutral | None | None | None | None | N |
L/T | 0.3055 | likely_benign | 0.2911 | benign | -0.83 | Destabilizing | 0.959 | D | 0.652 | neutral | None | None | None | None | N |
L/V | 0.1388 | likely_benign | 0.1249 | benign | -0.606 | Destabilizing | 0.016 | N | 0.323 | neutral | N | 0.432150683 | None | None | N |
L/W | 0.4261 | ambiguous | 0.4014 | ambiguous | -0.736 | Destabilizing | 0.998 | D | 0.69 | prob.neutral | None | None | None | None | N |
L/Y | 0.5344 | ambiguous | 0.526 | ambiguous | -0.504 | Destabilizing | 0.979 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.