Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19646 | 59161;59162;59163 | chr2:178593272;178593271;178593270 | chr2:179457999;179457998;179457997 |
N2AB | 18005 | 54238;54239;54240 | chr2:178593272;178593271;178593270 | chr2:179457999;179457998;179457997 |
N2A | 17078 | 51457;51458;51459 | chr2:178593272;178593271;178593270 | chr2:179457999;179457998;179457997 |
N2B | 10581 | 31966;31967;31968 | chr2:178593272;178593271;178593270 | chr2:179457999;179457998;179457997 |
Novex-1 | 10706 | 32341;32342;32343 | chr2:178593272;178593271;178593270 | chr2:179457999;179457998;179457997 |
Novex-2 | 10773 | 32542;32543;32544 | chr2:178593272;178593271;178593270 | chr2:179457999;179457998;179457997 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.489 | N | 0.235 | 0.266 | 0.247872288689 | gnomAD-4.0.0 | 1.59197E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85945E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3128 | likely_benign | 0.2747 | benign | -0.495 | Destabilizing | 0.961 | D | 0.415 | neutral | N | 0.48358401 | None | None | N |
E/C | 0.9485 | likely_pathogenic | 0.9452 | pathogenic | -0.021 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | N |
E/D | 0.4144 | ambiguous | 0.387 | ambiguous | -0.455 | Destabilizing | 0.98 | D | 0.496 | neutral | N | 0.50293294 | None | None | N |
E/F | 0.9555 | likely_pathogenic | 0.9492 | pathogenic | -0.446 | Destabilizing | 0.999 | D | 0.56 | neutral | None | None | None | None | N |
E/G | 0.5405 | ambiguous | 0.4944 | ambiguous | -0.709 | Destabilizing | 0.98 | D | 0.477 | neutral | N | 0.503186429 | None | None | N |
E/H | 0.8002 | likely_pathogenic | 0.793 | pathogenic | -0.389 | Destabilizing | 0.996 | D | 0.421 | neutral | None | None | None | None | N |
E/I | 0.7202 | likely_pathogenic | 0.6582 | pathogenic | 0.039 | Stabilizing | 0.999 | D | 0.55 | neutral | None | None | None | None | N |
E/K | 0.408 | ambiguous | 0.3584 | ambiguous | 0.143 | Stabilizing | 0.122 | N | 0.093 | neutral | N | 0.471470917 | None | None | N |
E/L | 0.7708 | likely_pathogenic | 0.7295 | pathogenic | 0.039 | Stabilizing | 0.985 | D | 0.519 | neutral | None | None | None | None | N |
E/M | 0.8038 | likely_pathogenic | 0.769 | pathogenic | 0.27 | Stabilizing | 1.0 | D | 0.514 | neutral | None | None | None | None | N |
E/N | 0.6946 | likely_pathogenic | 0.6597 | pathogenic | -0.097 | Destabilizing | 0.985 | D | 0.465 | neutral | None | None | None | None | N |
E/P | 0.5181 | ambiguous | 0.4766 | ambiguous | -0.118 | Destabilizing | 0.999 | D | 0.443 | neutral | None | None | None | None | N |
E/Q | 0.2721 | likely_benign | 0.267 | benign | -0.072 | Destabilizing | 0.489 | N | 0.235 | neutral | N | 0.468597308 | None | None | N |
E/R | 0.5306 | ambiguous | 0.5183 | ambiguous | 0.304 | Stabilizing | 0.942 | D | 0.445 | neutral | None | None | None | None | N |
E/S | 0.4988 | ambiguous | 0.4623 | ambiguous | -0.287 | Destabilizing | 0.97 | D | 0.423 | neutral | None | None | None | None | N |
E/T | 0.5701 | likely_pathogenic | 0.5044 | ambiguous | -0.119 | Destabilizing | 0.985 | D | 0.465 | neutral | None | None | None | None | N |
E/V | 0.4962 | ambiguous | 0.4263 | ambiguous | -0.118 | Destabilizing | 0.994 | D | 0.451 | neutral | N | 0.501122514 | None | None | N |
E/W | 0.9832 | likely_pathogenic | 0.9807 | pathogenic | -0.311 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
E/Y | 0.9113 | likely_pathogenic | 0.9049 | pathogenic | -0.213 | Destabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.