Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19654 | 59185;59186;59187 | chr2:178593248;178593247;178593246 | chr2:179457975;179457974;179457973 |
N2AB | 18013 | 54262;54263;54264 | chr2:178593248;178593247;178593246 | chr2:179457975;179457974;179457973 |
N2A | 17086 | 51481;51482;51483 | chr2:178593248;178593247;178593246 | chr2:179457975;179457974;179457973 |
N2B | 10589 | 31990;31991;31992 | chr2:178593248;178593247;178593246 | chr2:179457975;179457974;179457973 |
Novex-1 | 10714 | 32365;32366;32367 | chr2:178593248;178593247;178593246 | chr2:179457975;179457974;179457973 |
Novex-2 | 10781 | 32566;32567;32568 | chr2:178593248;178593247;178593246 | chr2:179457975;179457974;179457973 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.997 | N | 0.658 | 0.453 | 0.684766686716 | gnomAD-4.0.0 | 3.18396E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.8664E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7137 | likely_pathogenic | 0.6957 | pathogenic | -2.528 | Highly Destabilizing | 0.999 | D | 0.705 | prob.neutral | D | 0.555771124 | None | None | N |
V/C | 0.9393 | likely_pathogenic | 0.9384 | pathogenic | -2.217 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/D | 0.9977 | likely_pathogenic | 0.9976 | pathogenic | -3.505 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.654325283 | None | None | N |
V/E | 0.9946 | likely_pathogenic | 0.9946 | pathogenic | -3.218 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/F | 0.9492 | likely_pathogenic | 0.9546 | pathogenic | -1.286 | Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.585231684 | None | None | N |
V/G | 0.9081 | likely_pathogenic | 0.9049 | pathogenic | -3.093 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | D | 0.654325283 | None | None | N |
V/H | 0.9987 | likely_pathogenic | 0.9988 | pathogenic | -2.856 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/I | 0.1314 | likely_benign | 0.1416 | benign | -0.886 | Destabilizing | 0.997 | D | 0.658 | neutral | N | 0.506286389 | None | None | N |
V/K | 0.9968 | likely_pathogenic | 0.9969 | pathogenic | -2.054 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
V/L | 0.8095 | likely_pathogenic | 0.8039 | pathogenic | -0.886 | Destabilizing | 0.997 | D | 0.729 | prob.delet. | D | 0.524723493 | None | None | N |
V/M | 0.8818 | likely_pathogenic | 0.8833 | pathogenic | -1.281 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/N | 0.9911 | likely_pathogenic | 0.9912 | pathogenic | -2.65 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
V/P | 0.9959 | likely_pathogenic | 0.9954 | pathogenic | -1.416 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
V/Q | 0.9947 | likely_pathogenic | 0.9949 | pathogenic | -2.342 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
V/R | 0.9926 | likely_pathogenic | 0.9925 | pathogenic | -2.017 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/S | 0.9414 | likely_pathogenic | 0.9388 | pathogenic | -3.166 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/T | 0.8882 | likely_pathogenic | 0.8826 | pathogenic | -2.737 | Highly Destabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | N |
V/W | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -1.873 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/Y | 0.994 | likely_pathogenic | 0.9945 | pathogenic | -1.623 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.