Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19657 | 59194;59195;59196 | chr2:178593239;178593238;178593237 | chr2:179457966;179457965;179457964 |
N2AB | 18016 | 54271;54272;54273 | chr2:178593239;178593238;178593237 | chr2:179457966;179457965;179457964 |
N2A | 17089 | 51490;51491;51492 | chr2:178593239;178593238;178593237 | chr2:179457966;179457965;179457964 |
N2B | 10592 | 31999;32000;32001 | chr2:178593239;178593238;178593237 | chr2:179457966;179457965;179457964 |
Novex-1 | 10717 | 32374;32375;32376 | chr2:178593239;178593238;178593237 | chr2:179457966;179457965;179457964 |
Novex-2 | 10784 | 32575;32576;32577 | chr2:178593239;178593238;178593237 | chr2:179457966;179457965;179457964 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs200728232 | -1.487 | 0.977 | N | 0.409 | 0.308 | 0.407901774203 | gnomAD-2.1.1 | 5.72E-05 | None | None | None | None | I | None | 5.7856E-04 | 5.67E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs200728232 | -1.487 | 0.977 | N | 0.409 | 0.308 | 0.407901774203 | gnomAD-3.1.2 | 1.51184E-04 | None | None | None | None | I | None | 5.30734E-04 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs200728232 | -1.487 | 0.977 | N | 0.409 | 0.308 | 0.407901774203 | gnomAD-4.0.0 | 2.91313E-05 | None | None | None | None | I | None | 5.60703E-04 | 5.00367E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.20277E-05 |
E/K | None | None | 0.955 | N | 0.419 | 0.273 | 0.369867359543 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2974 | likely_benign | 0.2721 | benign | -0.634 | Destabilizing | 0.977 | D | 0.537 | neutral | N | 0.467530443 | None | None | I |
E/C | 0.8766 | likely_pathogenic | 0.8809 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
E/D | 0.76 | likely_pathogenic | 0.7643 | pathogenic | -1.272 | Destabilizing | 0.977 | D | 0.409 | neutral | N | 0.506096037 | None | None | I |
E/F | 0.887 | likely_pathogenic | 0.8871 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
E/G | 0.4953 | ambiguous | 0.4809 | ambiguous | -0.935 | Destabilizing | 0.993 | D | 0.718 | prob.delet. | N | 0.499348088 | None | None | I |
E/H | 0.8223 | likely_pathogenic | 0.8246 | pathogenic | -1.243 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | I |
E/I | 0.3797 | ambiguous | 0.3818 | ambiguous | 0.164 | Stabilizing | 0.998 | D | 0.887 | deleterious | None | None | None | None | I |
E/K | 0.2914 | likely_benign | 0.2718 | benign | -0.498 | Destabilizing | 0.955 | D | 0.419 | neutral | N | 0.472000668 | None | None | I |
E/L | 0.6499 | likely_pathogenic | 0.6358 | pathogenic | 0.164 | Stabilizing | 0.995 | D | 0.827 | deleterious | None | None | None | None | I |
E/M | 0.4933 | ambiguous | 0.4876 | ambiguous | 0.629 | Stabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
E/N | 0.7847 | likely_pathogenic | 0.7843 | pathogenic | -0.743 | Destabilizing | 0.995 | D | 0.649 | neutral | None | None | None | None | I |
E/P | 0.9953 | likely_pathogenic | 0.9958 | pathogenic | -0.081 | Destabilizing | 0.998 | D | 0.8 | deleterious | None | None | None | None | I |
E/Q | 0.1697 | likely_benign | 0.1642 | benign | -0.652 | Destabilizing | 0.568 | D | 0.251 | neutral | N | 0.469100606 | None | None | I |
E/R | 0.4758 | ambiguous | 0.4645 | ambiguous | -0.563 | Destabilizing | 0.99 | D | 0.644 | neutral | None | None | None | None | I |
E/S | 0.4773 | ambiguous | 0.4712 | ambiguous | -1.116 | Destabilizing | 0.983 | D | 0.454 | neutral | None | None | None | None | I |
E/T | 0.4272 | ambiguous | 0.4268 | ambiguous | -0.848 | Destabilizing | 0.995 | D | 0.728 | prob.delet. | None | None | None | None | I |
E/V | 0.2268 | likely_benign | 0.2213 | benign | -0.081 | Destabilizing | 0.997 | D | 0.808 | deleterious | N | 0.474162303 | None | None | I |
E/W | 0.9734 | likely_pathogenic | 0.9738 | pathogenic | -1.095 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
E/Y | 0.8763 | likely_pathogenic | 0.8792 | pathogenic | -0.776 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.