Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1965759194;59195;59196 chr2:178593239;178593238;178593237chr2:179457966;179457965;179457964
N2AB1801654271;54272;54273 chr2:178593239;178593238;178593237chr2:179457966;179457965;179457964
N2A1708951490;51491;51492 chr2:178593239;178593238;178593237chr2:179457966;179457965;179457964
N2B1059231999;32000;32001 chr2:178593239;178593238;178593237chr2:179457966;179457965;179457964
Novex-11071732374;32375;32376 chr2:178593239;178593238;178593237chr2:179457966;179457965;179457964
Novex-21078432575;32576;32577 chr2:178593239;178593238;178593237chr2:179457966;179457965;179457964
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAA
  • RefSeq wild type template codon: CTT
  • Domain: Fn3-30
  • Domain position: 79
  • Structural Position: 111
  • Q(SASA): 0.1809
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/D rs200728232 -1.487 0.977 N 0.409 0.308 0.407901774203 gnomAD-2.1.1 5.72E-05 None None None None I None 5.7856E-04 5.67E-05 None 0 0 None 0 None 0 0 0
E/D rs200728232 -1.487 0.977 N 0.409 0.308 0.407901774203 gnomAD-3.1.2 1.51184E-04 None None None None I None 5.30734E-04 6.55E-05 0 0 0 None 0 0 0 0 0
E/D rs200728232 -1.487 0.977 N 0.409 0.308 0.407901774203 gnomAD-4.0.0 2.91313E-05 None None None None I None 5.60703E-04 5.00367E-05 None 0 0 None 0 0 0 0 3.20277E-05
E/K None None 0.955 N 0.419 0.273 0.369867359543 gnomAD-4.0.0 1.20032E-06 None None None None I None 0 0 None 0 0 None 0 0 1.3125E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.2974 likely_benign 0.2721 benign -0.634 Destabilizing 0.977 D 0.537 neutral N 0.467530443 None None I
E/C 0.8766 likely_pathogenic 0.8809 pathogenic -0.412 Destabilizing 1.0 D 0.859 deleterious None None None None I
E/D 0.76 likely_pathogenic 0.7643 pathogenic -1.272 Destabilizing 0.977 D 0.409 neutral N 0.506096037 None None I
E/F 0.887 likely_pathogenic 0.8871 pathogenic -0.98 Destabilizing 1.0 D 0.881 deleterious None None None None I
E/G 0.4953 ambiguous 0.4809 ambiguous -0.935 Destabilizing 0.993 D 0.718 prob.delet. N 0.499348088 None None I
E/H 0.8223 likely_pathogenic 0.8246 pathogenic -1.243 Destabilizing 0.999 D 0.691 prob.neutral None None None None I
E/I 0.3797 ambiguous 0.3818 ambiguous 0.164 Stabilizing 0.998 D 0.887 deleterious None None None None I
E/K 0.2914 likely_benign 0.2718 benign -0.498 Destabilizing 0.955 D 0.419 neutral N 0.472000668 None None I
E/L 0.6499 likely_pathogenic 0.6358 pathogenic 0.164 Stabilizing 0.995 D 0.827 deleterious None None None None I
E/M 0.4933 ambiguous 0.4876 ambiguous 0.629 Stabilizing 1.0 D 0.863 deleterious None None None None I
E/N 0.7847 likely_pathogenic 0.7843 pathogenic -0.743 Destabilizing 0.995 D 0.649 neutral None None None None I
E/P 0.9953 likely_pathogenic 0.9958 pathogenic -0.081 Destabilizing 0.998 D 0.8 deleterious None None None None I
E/Q 0.1697 likely_benign 0.1642 benign -0.652 Destabilizing 0.568 D 0.251 neutral N 0.469100606 None None I
E/R 0.4758 ambiguous 0.4645 ambiguous -0.563 Destabilizing 0.99 D 0.644 neutral None None None None I
E/S 0.4773 ambiguous 0.4712 ambiguous -1.116 Destabilizing 0.983 D 0.454 neutral None None None None I
E/T 0.4272 ambiguous 0.4268 ambiguous -0.848 Destabilizing 0.995 D 0.728 prob.delet. None None None None I
E/V 0.2268 likely_benign 0.2213 benign -0.081 Destabilizing 0.997 D 0.808 deleterious N 0.474162303 None None I
E/W 0.9734 likely_pathogenic 0.9738 pathogenic -1.095 Destabilizing 1.0 D 0.863 deleterious None None None None I
E/Y 0.8763 likely_pathogenic 0.8792 pathogenic -0.776 Destabilizing 0.999 D 0.869 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.