Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19662 | 59209;59210;59211 | chr2:178593224;178593223;178593222 | chr2:179457951;179457950;179457949 |
N2AB | 18021 | 54286;54287;54288 | chr2:178593224;178593223;178593222 | chr2:179457951;179457950;179457949 |
N2A | 17094 | 51505;51506;51507 | chr2:178593224;178593223;178593222 | chr2:179457951;179457950;179457949 |
N2B | 10597 | 32014;32015;32016 | chr2:178593224;178593223;178593222 | chr2:179457951;179457950;179457949 |
Novex-1 | 10722 | 32389;32390;32391 | chr2:178593224;178593223;178593222 | chr2:179457951;179457950;179457949 |
Novex-2 | 10789 | 32590;32591;32592 | chr2:178593224;178593223;178593222 | chr2:179457951;179457950;179457949 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.324 | N | 0.481 | 0.139 | 0.460795861206 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 1.01626E-03 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs886055259 | None | None | N | 0.193 | 0.072 | 0.251639045875 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93949E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs886055259 | None | None | N | 0.193 | 0.072 | 0.251639045875 | gnomAD-4.0.0 | 1.79432E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 3.40351E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1653 | likely_benign | 0.1607 | benign | -0.899 | Destabilizing | 0.004 | N | 0.325 | neutral | None | None | None | None | I |
I/C | 0.4959 | ambiguous | 0.5323 | ambiguous | -0.761 | Destabilizing | 0.818 | D | 0.575 | neutral | None | None | None | None | I |
I/D | 0.6252 | likely_pathogenic | 0.6377 | pathogenic | 0.107 | Stabilizing | 0.818 | D | 0.628 | neutral | None | None | None | None | I |
I/E | 0.431 | ambiguous | 0.4248 | ambiguous | 0.048 | Stabilizing | 0.563 | D | 0.611 | neutral | None | None | None | None | I |
I/F | 0.1505 | likely_benign | 0.1599 | benign | -0.704 | Destabilizing | 0.627 | D | 0.576 | neutral | N | 0.510534109 | None | None | I |
I/G | 0.5338 | ambiguous | 0.5302 | ambiguous | -1.114 | Destabilizing | 0.388 | N | 0.573 | neutral | None | None | None | None | I |
I/H | 0.4161 | ambiguous | 0.425 | ambiguous | -0.258 | Destabilizing | 0.981 | D | 0.623 | neutral | None | None | None | None | I |
I/K | 0.2386 | likely_benign | 0.2343 | benign | -0.353 | Destabilizing | 0.818 | D | 0.613 | neutral | None | None | None | None | I |
I/L | 0.1108 | likely_benign | 0.1122 | benign | -0.437 | Destabilizing | 0.041 | N | 0.237 | neutral | N | 0.438287222 | None | None | I |
I/M | 0.105 | likely_benign | 0.1045 | benign | -0.442 | Destabilizing | 0.627 | D | 0.587 | neutral | N | 0.503685495 | None | None | I |
I/N | 0.2474 | likely_benign | 0.2575 | benign | -0.158 | Destabilizing | 0.912 | D | 0.631 | neutral | N | 0.519460237 | None | None | I |
I/P | 0.4038 | ambiguous | 0.4221 | ambiguous | -0.557 | Destabilizing | 0.818 | D | 0.629 | neutral | None | None | None | None | I |
I/Q | 0.3193 | likely_benign | 0.3171 | benign | -0.361 | Destabilizing | 0.932 | D | 0.631 | neutral | None | None | None | None | I |
I/R | 0.1879 | likely_benign | 0.1847 | benign | 0.183 | Stabilizing | 0.818 | D | 0.631 | neutral | None | None | None | None | I |
I/S | 0.2123 | likely_benign | 0.2067 | benign | -0.777 | Destabilizing | 0.193 | N | 0.581 | neutral | N | 0.49223635 | None | None | I |
I/T | 0.0896 | likely_benign | 0.0874 | benign | -0.717 | Destabilizing | 0.324 | N | 0.481 | neutral | N | 0.450216369 | None | None | I |
I/V | 0.0661 | likely_benign | 0.0657 | benign | -0.557 | Destabilizing | None | N | 0.193 | neutral | N | 0.406580235 | None | None | I |
I/W | 0.6651 | likely_pathogenic | 0.6868 | pathogenic | -0.668 | Destabilizing | 0.981 | D | 0.657 | neutral | None | None | None | None | I |
I/Y | 0.4234 | ambiguous | 0.4564 | ambiguous | -0.43 | Destabilizing | 0.818 | D | 0.587 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.