Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19670 | 59233;59234;59235 | chr2:178593200;178593199;178593198 | chr2:179457927;179457926;179457925 |
N2AB | 18029 | 54310;54311;54312 | chr2:178593200;178593199;178593198 | chr2:179457927;179457926;179457925 |
N2A | 17102 | 51529;51530;51531 | chr2:178593200;178593199;178593198 | chr2:179457927;179457926;179457925 |
N2B | 10605 | 32038;32039;32040 | chr2:178593200;178593199;178593198 | chr2:179457927;179457926;179457925 |
Novex-1 | 10730 | 32413;32414;32415 | chr2:178593200;178593199;178593198 | chr2:179457927;179457926;179457925 |
Novex-2 | 10797 | 32614;32615;32616 | chr2:178593200;178593199;178593198 | chr2:179457927;179457926;179457925 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs2050621372 | None | 0.999 | N | 0.726 | 0.145 | 0.197625483188 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76917E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3029 | likely_benign | 0.3311 | benign | 0.046 | Stabilizing | 0.997 | D | 0.63 | neutral | None | None | None | None | N |
K/C | 0.6903 | likely_pathogenic | 0.7416 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.731 | deleterious | None | None | None | None | N |
K/D | 0.4959 | ambiguous | 0.5363 | ambiguous | -0.018 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
K/E | 0.1811 | likely_benign | 0.1906 | benign | -0.009 | Destabilizing | 0.991 | D | 0.623 | neutral | N | 0.443668825 | None | None | N |
K/F | 0.6964 | likely_pathogenic | 0.7369 | pathogenic | -0.167 | Destabilizing | 1.0 | D | 0.666 | prob.neutral | None | None | None | None | N |
K/G | 0.4639 | ambiguous | 0.5025 | ambiguous | -0.137 | Destabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | N |
K/H | 0.3429 | ambiguous | 0.3745 | ambiguous | -0.302 | Destabilizing | 1.0 | D | 0.695 | prob.delet. | None | None | None | None | N |
K/I | 0.2831 | likely_benign | 0.3149 | benign | 0.449 | Stabilizing | 1.0 | D | 0.698 | prob.delet. | N | 0.472148344 | None | None | N |
K/L | 0.2851 | likely_benign | 0.3106 | benign | 0.449 | Stabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | N |
K/M | 0.2315 | likely_benign | 0.2536 | benign | 0.082 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/N | 0.3908 | ambiguous | 0.4314 | ambiguous | 0.133 | Stabilizing | 0.999 | D | 0.726 | deleterious | N | 0.48623031 | None | None | N |
K/P | 0.4448 | ambiguous | 0.4699 | ambiguous | 0.342 | Stabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
K/Q | 0.1426 | likely_benign | 0.1485 | benign | None | Stabilizing | 0.997 | D | 0.737 | deleterious | N | 0.490444052 | None | None | N |
K/R | 0.0947 | likely_benign | 0.0953 | benign | -0.055 | Destabilizing | 0.451 | N | 0.302 | neutral | N | 0.496716663 | None | None | N |
K/S | 0.3923 | ambiguous | 0.4271 | ambiguous | -0.3 | Destabilizing | 0.997 | D | 0.657 | prob.neutral | None | None | None | None | N |
K/T | 0.1981 | likely_benign | 0.2153 | benign | -0.151 | Destabilizing | 0.999 | D | 0.705 | prob.delet. | N | 0.50760566 | None | None | N |
K/V | 0.2546 | likely_benign | 0.2784 | benign | 0.342 | Stabilizing | 0.999 | D | 0.703 | prob.delet. | None | None | None | None | N |
K/W | 0.7597 | likely_pathogenic | 0.8011 | pathogenic | -0.227 | Destabilizing | 1.0 | D | 0.725 | deleterious | None | None | None | None | N |
K/Y | 0.5719 | likely_pathogenic | 0.6257 | pathogenic | 0.126 | Stabilizing | 1.0 | D | 0.692 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.