Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19688 | 59287;59288;59289 | chr2:178593057;178593056;178593055 | chr2:179457784;179457783;179457782 |
N2AB | 18047 | 54364;54365;54366 | chr2:178593057;178593056;178593055 | chr2:179457784;179457783;179457782 |
N2A | 17120 | 51583;51584;51585 | chr2:178593057;178593056;178593055 | chr2:179457784;179457783;179457782 |
N2B | 10623 | 32092;32093;32094 | chr2:178593057;178593056;178593055 | chr2:179457784;179457783;179457782 |
Novex-1 | 10748 | 32467;32468;32469 | chr2:178593057;178593056;178593055 | chr2:179457784;179457783;179457782 |
Novex-2 | 10815 | 32668;32669;32670 | chr2:178593057;178593056;178593055 | chr2:179457784;179457783;179457782 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.31 | N | 0.269 | 0.185 | 0.282179105231 | gnomAD-4.0.0 | 1.59269E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86002E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1736 | likely_benign | 0.1582 | benign | -0.666 | Destabilizing | 0.826 | D | 0.486 | neutral | N | 0.466013187 | None | None | N |
E/C | 0.7615 | likely_pathogenic | 0.7686 | pathogenic | -0.349 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
E/D | 0.2725 | likely_benign | 0.2483 | benign | -0.794 | Destabilizing | 0.959 | D | 0.49 | neutral | N | 0.520039027 | None | None | N |
E/F | 0.7011 | likely_pathogenic | 0.6942 | pathogenic | -0.225 | Destabilizing | 0.991 | D | 0.581 | neutral | None | None | None | None | N |
E/G | 0.3245 | likely_benign | 0.2768 | benign | -0.971 | Destabilizing | 0.959 | D | 0.547 | neutral | N | 0.482409148 | None | None | N |
E/H | 0.4446 | ambiguous | 0.4256 | ambiguous | -0.291 | Destabilizing | 0.991 | D | 0.566 | neutral | None | None | None | None | N |
E/I | 0.2396 | likely_benign | 0.2367 | benign | 0.144 | Stabilizing | 0.884 | D | 0.6 | neutral | None | None | None | None | N |
E/K | 0.148 | likely_benign | 0.1225 | benign | -0.331 | Destabilizing | 0.134 | N | 0.172 | neutral | N | 0.453235245 | None | None | N |
E/L | 0.3633 | ambiguous | 0.3457 | ambiguous | 0.144 | Stabilizing | 0.884 | D | 0.541 | neutral | None | None | None | None | N |
E/M | 0.3686 | ambiguous | 0.3466 | ambiguous | 0.38 | Stabilizing | 0.991 | D | 0.574 | neutral | None | None | None | None | N |
E/N | 0.373 | ambiguous | 0.3546 | ambiguous | -0.74 | Destabilizing | 0.969 | D | 0.525 | neutral | None | None | None | None | N |
E/P | 0.9787 | likely_pathogenic | 0.97 | pathogenic | -0.105 | Destabilizing | 0.997 | D | 0.605 | neutral | None | None | None | None | N |
E/Q | 0.1259 | likely_benign | 0.1192 | benign | -0.638 | Destabilizing | 0.31 | N | 0.269 | neutral | N | 0.502759988 | None | None | N |
E/R | 0.2432 | likely_benign | 0.2123 | benign | -0.012 | Destabilizing | 0.046 | N | 0.305 | neutral | None | None | None | None | N |
E/S | 0.2601 | likely_benign | 0.2436 | benign | -0.97 | Destabilizing | 0.939 | D | 0.499 | neutral | None | None | None | None | N |
E/T | 0.1993 | likely_benign | 0.1881 | benign | -0.725 | Destabilizing | 0.939 | D | 0.533 | neutral | None | None | None | None | N |
E/V | 0.1417 | likely_benign | 0.1354 | benign | -0.105 | Destabilizing | 0.134 | N | 0.4 | neutral | N | 0.459894645 | None | None | N |
E/W | 0.9141 | likely_pathogenic | 0.8996 | pathogenic | 0.003 | Stabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | N |
E/Y | 0.6508 | likely_pathogenic | 0.6252 | pathogenic | 0.014 | Stabilizing | 0.997 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.