Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19689 | 59290;59291;59292 | chr2:178593054;178593053;178593052 | chr2:179457781;179457780;179457779 |
N2AB | 18048 | 54367;54368;54369 | chr2:178593054;178593053;178593052 | chr2:179457781;179457780;179457779 |
N2A | 17121 | 51586;51587;51588 | chr2:178593054;178593053;178593052 | chr2:179457781;179457780;179457779 |
N2B | 10624 | 32095;32096;32097 | chr2:178593054;178593053;178593052 | chr2:179457781;179457780;179457779 |
Novex-1 | 10749 | 32470;32471;32472 | chr2:178593054;178593053;178593052 | chr2:179457781;179457780;179457779 |
Novex-2 | 10816 | 32671;32672;32673 | chr2:178593054;178593053;178593052 | chr2:179457781;179457780;179457779 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.767 | N | 0.249 | 0.254 | 0.316494231283 | gnomAD-4.0.0 | 1.59227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85972E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.56 | ambiguous | 0.5671 | pathogenic | -0.91 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
A/D | 0.9134 | likely_pathogenic | 0.8391 | pathogenic | -0.957 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/E | 0.8461 | likely_pathogenic | 0.745 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.48912478 | None | None | N |
A/F | 0.7156 | likely_pathogenic | 0.6216 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
A/G | 0.3513 | ambiguous | 0.3022 | benign | -1.089 | Destabilizing | 0.999 | D | 0.643 | neutral | N | 0.476589933 | None | None | N |
A/H | 0.906 | likely_pathogenic | 0.8693 | pathogenic | -1.156 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
A/I | 0.2973 | likely_benign | 0.2235 | benign | -0.197 | Destabilizing | 0.994 | D | 0.691 | prob.neutral | None | None | None | None | N |
A/K | 0.9146 | likely_pathogenic | 0.8546 | pathogenic | -1.154 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
A/L | 0.4494 | ambiguous | 0.3647 | ambiguous | -0.197 | Destabilizing | 0.994 | D | 0.603 | neutral | None | None | None | None | N |
A/M | 0.487 | ambiguous | 0.3889 | ambiguous | -0.287 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
A/N | 0.7881 | likely_pathogenic | 0.6891 | pathogenic | -0.934 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
A/P | 0.3008 | likely_benign | 0.259 | benign | -0.359 | Destabilizing | 1.0 | D | 0.833 | deleterious | N | 0.520351245 | None | None | N |
A/Q | 0.8542 | likely_pathogenic | 0.7939 | pathogenic | -1.028 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
A/R | 0.8843 | likely_pathogenic | 0.8229 | pathogenic | -0.843 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
A/S | 0.2426 | likely_benign | 0.208 | benign | -1.311 | Destabilizing | 0.998 | D | 0.634 | neutral | N | 0.47157673 | None | None | N |
A/T | 0.2251 | likely_benign | 0.1591 | benign | -1.203 | Destabilizing | 0.996 | D | 0.658 | neutral | N | 0.479401089 | None | None | N |
A/V | 0.1413 | likely_benign | 0.1032 | benign | -0.359 | Destabilizing | 0.767 | D | 0.249 | neutral | N | 0.390013272 | None | None | N |
A/W | 0.9496 | likely_pathogenic | 0.9267 | pathogenic | -1.196 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
A/Y | 0.8153 | likely_pathogenic | 0.7623 | pathogenic | -0.767 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.