Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19692 | 59299;59300;59301 | chr2:178593045;178593044;178593043 | chr2:179457772;179457771;179457770 |
N2AB | 18051 | 54376;54377;54378 | chr2:178593045;178593044;178593043 | chr2:179457772;179457771;179457770 |
N2A | 17124 | 51595;51596;51597 | chr2:178593045;178593044;178593043 | chr2:179457772;179457771;179457770 |
N2B | 10627 | 32104;32105;32106 | chr2:178593045;178593044;178593043 | chr2:179457772;179457771;179457770 |
Novex-1 | 10752 | 32479;32480;32481 | chr2:178593045;178593044;178593043 | chr2:179457772;179457771;179457770 |
Novex-2 | 10819 | 32680;32681;32682 | chr2:178593045;178593044;178593043 | chr2:179457772;179457771;179457770 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs771977738 | -0.593 | 0.425 | N | 0.285 | 0.16 | 0.17948927462 | gnomAD-2.1.1 | 5.24E-05 | None | None | None | None | N | None | 0 | 3.77665E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs771977738 | -0.593 | 0.425 | N | 0.285 | 0.16 | 0.17948927462 | gnomAD-4.0.0 | 1.09498E-05 | None | None | None | None | N | None | 0 | 3.35706E-04 | None | 0 | 0 | None | 0 | 0 | 8.99588E-07 | 0 | 0 |
T/I | rs774404108 | None | 0.642 | N | 0.345 | 0.175 | 0.240491677333 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs774404108 | None | 0.642 | N | 0.345 | 0.175 | 0.240491677333 | gnomAD-4.0.0 | 6.57687E-06 | None | None | None | None | N | None | 2.41406E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/K | None | -0.533 | 0.001 | N | 0.165 | 0.188 | 0.227260227426 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
T/K | None | -0.533 | 0.001 | N | 0.165 | 0.188 | 0.227260227426 | gnomAD-4.0.0 | 2.05309E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79918E-06 | 0 | 1.65684E-05 |
T/R | rs774404108 | -0.118 | 0.473 | N | 0.383 | 0.222 | None | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.45E-05 | 0 |
T/R | rs774404108 | -0.118 | 0.473 | N | 0.383 | 0.222 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
T/R | rs774404108 | -0.118 | 0.473 | N | 0.383 | 0.222 | None | gnomAD-4.0.0 | 1.73562E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.28891E-05 | 0 | 1.60138E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1516 | likely_benign | 0.1134 | benign | -0.251 | Destabilizing | 0.425 | N | 0.285 | neutral | N | 0.438172579 | None | None | N |
T/C | 0.4927 | ambiguous | 0.4427 | ambiguous | -0.699 | Destabilizing | 0.995 | D | 0.317 | neutral | None | None | None | None | N |
T/D | 0.8204 | likely_pathogenic | 0.7315 | pathogenic | -1.975 | Destabilizing | 0.704 | D | 0.361 | neutral | None | None | None | None | N |
T/E | 0.6436 | likely_pathogenic | 0.524 | ambiguous | -1.933 | Destabilizing | 0.329 | N | 0.364 | neutral | None | None | None | None | N |
T/F | 0.48 | ambiguous | 0.355 | ambiguous | -0.688 | Destabilizing | 0.003 | N | 0.216 | neutral | None | None | None | None | N |
T/G | 0.4924 | ambiguous | 0.4147 | ambiguous | -0.48 | Destabilizing | 0.704 | D | 0.386 | neutral | None | None | None | None | N |
T/H | 0.4406 | ambiguous | 0.3563 | ambiguous | -1.009 | Destabilizing | 0.981 | D | 0.386 | neutral | None | None | None | None | N |
T/I | 0.2529 | likely_benign | 0.1899 | benign | 0.266 | Stabilizing | 0.642 | D | 0.345 | neutral | N | 0.39857404 | None | None | N |
T/K | 0.2915 | likely_benign | 0.221 | benign | -0.468 | Destabilizing | 0.001 | N | 0.165 | neutral | N | 0.403233286 | None | None | N |
T/L | 0.2226 | likely_benign | 0.1667 | benign | 0.266 | Stabilizing | 0.329 | N | 0.37 | neutral | None | None | None | None | N |
T/M | 0.1565 | likely_benign | 0.1103 | benign | 0.483 | Stabilizing | 0.981 | D | 0.349 | neutral | None | None | None | None | N |
T/N | 0.3641 | ambiguous | 0.2821 | benign | -0.987 | Destabilizing | 0.704 | D | 0.289 | neutral | None | None | None | None | N |
T/P | 0.5199 | ambiguous | 0.4062 | ambiguous | 0.124 | Stabilizing | 0.784 | D | 0.372 | neutral | N | 0.464359102 | None | None | N |
T/Q | 0.3782 | ambiguous | 0.2985 | benign | -1.221 | Destabilizing | 0.704 | D | 0.371 | neutral | None | None | None | None | N |
T/R | 0.28 | likely_benign | 0.1986 | benign | -0.298 | Destabilizing | 0.473 | N | 0.383 | neutral | N | 0.469322205 | None | None | N |
T/S | 0.2073 | likely_benign | 0.1677 | benign | -0.864 | Destabilizing | 0.425 | N | 0.33 | neutral | N | 0.459259927 | None | None | N |
T/V | 0.1798 | likely_benign | 0.1421 | benign | 0.124 | Stabilizing | 0.495 | N | 0.292 | neutral | None | None | None | None | N |
T/W | 0.8186 | likely_pathogenic | 0.7206 | pathogenic | -0.885 | Destabilizing | 0.995 | D | 0.363 | neutral | None | None | None | None | N |
T/Y | 0.4963 | ambiguous | 0.3718 | ambiguous | -0.405 | Destabilizing | 0.543 | D | 0.392 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.