Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19693 | 59302;59303;59304 | chr2:178593042;178593041;178593040 | chr2:179457769;179457768;179457767 |
N2AB | 18052 | 54379;54380;54381 | chr2:178593042;178593041;178593040 | chr2:179457769;179457768;179457767 |
N2A | 17125 | 51598;51599;51600 | chr2:178593042;178593041;178593040 | chr2:179457769;179457768;179457767 |
N2B | 10628 | 32107;32108;32109 | chr2:178593042;178593041;178593040 | chr2:179457769;179457768;179457767 |
Novex-1 | 10753 | 32482;32483;32484 | chr2:178593042;178593041;178593040 | chr2:179457769;179457768;179457767 |
Novex-2 | 10820 | 32683;32684;32685 | chr2:178593042;178593041;178593040 | chr2:179457769;179457768;179457767 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1218974177 | None | 0.948 | N | 0.441 | 0.321 | 0.397540356873 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93723E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs1218974177 | None | 0.948 | N | 0.441 | 0.321 | 0.397540356873 | gnomAD-4.0.0 | 6.57393E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.93723E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/I | None | None | 0.998 | N | 0.662 | 0.487 | 0.619139198567 | gnomAD-4.0.0 | 1.59206E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85946E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2473 | likely_benign | 0.2152 | benign | -0.462 | Destabilizing | 0.948 | D | 0.441 | neutral | N | 0.481540683 | None | None | N |
T/C | 0.7901 | likely_pathogenic | 0.7686 | pathogenic | -0.469 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
T/D | 0.7256 | likely_pathogenic | 0.6706 | pathogenic | -1.445 | Destabilizing | 0.998 | D | 0.613 | neutral | None | None | None | None | N |
T/E | 0.8344 | likely_pathogenic | 0.7867 | pathogenic | -1.466 | Destabilizing | 0.998 | D | 0.617 | neutral | None | None | None | None | N |
T/F | 0.8137 | likely_pathogenic | 0.7556 | pathogenic | -0.943 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
T/G | 0.327 | likely_benign | 0.3296 | benign | -0.656 | Destabilizing | 0.992 | D | 0.535 | neutral | None | None | None | None | N |
T/H | 0.6619 | likely_pathogenic | 0.6054 | pathogenic | -1.144 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
T/I | 0.8687 | likely_pathogenic | 0.8167 | pathogenic | -0.044 | Destabilizing | 0.998 | D | 0.662 | neutral | N | 0.511610355 | None | None | N |
T/K | 0.6696 | likely_pathogenic | 0.588 | pathogenic | -0.65 | Destabilizing | 0.997 | D | 0.622 | neutral | N | 0.487376807 | None | None | N |
T/L | 0.5095 | ambiguous | 0.4253 | ambiguous | -0.044 | Destabilizing | 0.996 | D | 0.555 | neutral | None | None | None | None | N |
T/M | 0.4318 | ambiguous | 0.3465 | ambiguous | 0.474 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
T/N | 0.3226 | likely_benign | 0.2861 | benign | -0.849 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | N |
T/P | 0.7985 | likely_pathogenic | 0.7388 | pathogenic | -0.154 | Destabilizing | 0.998 | D | 0.66 | neutral | N | 0.516383295 | None | None | N |
T/Q | 0.6412 | likely_pathogenic | 0.588 | pathogenic | -1.189 | Destabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | N |
T/R | 0.5876 | likely_pathogenic | 0.4945 | ambiguous | -0.281 | Destabilizing | 0.998 | D | 0.667 | neutral | N | 0.470905167 | None | None | N |
T/S | 0.1394 | likely_benign | 0.1399 | benign | -0.849 | Destabilizing | 0.775 | D | 0.227 | neutral | N | 0.46891956 | None | None | N |
T/V | 0.6795 | likely_pathogenic | 0.6118 | pathogenic | -0.154 | Destabilizing | 0.996 | D | 0.52 | neutral | None | None | None | None | N |
T/W | 0.9571 | likely_pathogenic | 0.9389 | pathogenic | -0.994 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
T/Y | 0.803 | likely_pathogenic | 0.756 | pathogenic | -0.638 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.