Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19710 | 59353;59354;59355 | chr2:178592991;178592990;178592989 | chr2:179457718;179457717;179457716 |
N2AB | 18069 | 54430;54431;54432 | chr2:178592991;178592990;178592989 | chr2:179457718;179457717;179457716 |
N2A | 17142 | 51649;51650;51651 | chr2:178592991;178592990;178592989 | chr2:179457718;179457717;179457716 |
N2B | 10645 | 32158;32159;32160 | chr2:178592991;178592990;178592989 | chr2:179457718;179457717;179457716 |
Novex-1 | 10770 | 32533;32534;32535 | chr2:178592991;178592990;178592989 | chr2:179457718;179457717;179457716 |
Novex-2 | 10837 | 32734;32735;32736 | chr2:178592991;178592990;178592989 | chr2:179457718;179457717;179457716 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.801 | N | 0.534 | 0.337 | 0.215869574891 | gnomAD-4.0.0 | 1.59181E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43303E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1212 | likely_benign | 0.1246 | benign | -0.46 | Destabilizing | 0.325 | N | 0.422 | neutral | None | None | None | None | I |
S/C | 0.0959 | likely_benign | 0.1036 | benign | -0.239 | Destabilizing | 0.997 | D | 0.619 | neutral | N | 0.47566488 | None | None | I |
S/D | 0.6563 | likely_pathogenic | 0.6279 | pathogenic | -0.007 | Destabilizing | 0.915 | D | 0.511 | neutral | None | None | None | None | I |
S/E | 0.7464 | likely_pathogenic | 0.6848 | pathogenic | -0.083 | Destabilizing | 0.915 | D | 0.583 | neutral | None | None | None | None | I |
S/F | 0.5642 | likely_pathogenic | 0.536 | ambiguous | -0.933 | Destabilizing | 0.991 | D | 0.682 | prob.neutral | None | None | None | None | I |
S/G | 0.0671 | likely_benign | 0.0782 | benign | -0.614 | Destabilizing | 0.002 | N | 0.279 | neutral | N | 0.461718655 | None | None | I |
S/H | 0.6326 | likely_pathogenic | 0.5381 | ambiguous | -1.138 | Destabilizing | 0.991 | D | 0.622 | neutral | None | None | None | None | I |
S/I | 0.5414 | ambiguous | 0.5207 | ambiguous | -0.179 | Destabilizing | 0.989 | D | 0.685 | prob.neutral | N | 0.492501687 | None | None | I |
S/K | 0.8874 | likely_pathogenic | 0.8162 | pathogenic | -0.536 | Destabilizing | 0.915 | D | 0.59 | neutral | None | None | None | None | I |
S/L | 0.2233 | likely_benign | 0.2124 | benign | -0.179 | Destabilizing | 0.915 | D | 0.693 | prob.neutral | None | None | None | None | I |
S/M | 0.3525 | ambiguous | 0.3547 | ambiguous | 0.192 | Stabilizing | 0.998 | D | 0.617 | neutral | None | None | None | None | I |
S/N | 0.3038 | likely_benign | 0.2875 | benign | -0.265 | Destabilizing | 0.801 | D | 0.534 | neutral | N | 0.480322461 | None | None | I |
S/P | 0.962 | likely_pathogenic | 0.9525 | pathogenic | -0.242 | Destabilizing | 0.991 | D | 0.639 | neutral | None | None | None | None | I |
S/Q | 0.688 | likely_pathogenic | 0.6033 | pathogenic | -0.54 | Destabilizing | 0.991 | D | 0.613 | neutral | None | None | None | None | I |
S/R | 0.842 | likely_pathogenic | 0.7505 | pathogenic | -0.316 | Destabilizing | 0.966 | D | 0.637 | neutral | N | 0.483232069 | None | None | I |
S/T | 0.2028 | likely_benign | 0.2049 | benign | -0.367 | Destabilizing | 0.771 | D | 0.529 | neutral | N | 0.511632974 | None | None | I |
S/V | 0.4865 | ambiguous | 0.4655 | ambiguous | -0.242 | Destabilizing | 0.915 | D | 0.691 | prob.neutral | None | None | None | None | I |
S/W | 0.6844 | likely_pathogenic | 0.6132 | pathogenic | -0.905 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | I |
S/Y | 0.4818 | ambiguous | 0.4331 | ambiguous | -0.64 | Destabilizing | 0.991 | D | 0.681 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.