Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19712 | 59359;59360;59361 | chr2:178592985;178592984;178592983 | chr2:179457712;179457711;179457710 |
N2AB | 18071 | 54436;54437;54438 | chr2:178592985;178592984;178592983 | chr2:179457712;179457711;179457710 |
N2A | 17144 | 51655;51656;51657 | chr2:178592985;178592984;178592983 | chr2:179457712;179457711;179457710 |
N2B | 10647 | 32164;32165;32166 | chr2:178592985;178592984;178592983 | chr2:179457712;179457711;179457710 |
Novex-1 | 10772 | 32539;32540;32541 | chr2:178592985;178592984;178592983 | chr2:179457712;179457711;179457710 |
Novex-2 | 10839 | 32740;32741;32742 | chr2:178592985;178592984;178592983 | chr2:179457712;179457711;179457710 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs547436872 | -1.7 | 1.0 | N | 0.818 | 0.546 | 0.566919426312 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
I/F | rs547436872 | -1.7 | 1.0 | N | 0.818 | 0.546 | 0.566919426312 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/F | rs547436872 | -1.7 | 1.0 | N | 0.818 | 0.546 | 0.566919426312 | gnomAD-4.0.0 | 8.05745E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.10203E-05 | 0 | 0 |
I/L | rs547436872 | -1.081 | 0.993 | N | 0.413 | 0.346 | 0.529361283073 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/L | rs547436872 | -1.081 | 0.993 | N | 0.413 | 0.346 | 0.529361283073 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
I/L | rs547436872 | -1.081 | 0.993 | N | 0.413 | 0.346 | 0.529361283073 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
I/L | rs547436872 | -1.081 | 0.993 | N | 0.413 | 0.346 | 0.529361283073 | gnomAD-4.0.0 | 6.84302E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15953E-05 | 0 |
I/M | rs928532463 | -0.927 | 1.0 | D | 0.803 | 0.47 | 0.467074840246 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/M | rs928532463 | -0.927 | 1.0 | D | 0.803 | 0.47 | 0.467074840246 | gnomAD-4.0.0 | 3.18356E-06 | None | None | None | None | N | None | 0 | 2.28728E-05 | None | 0 | 2.77562E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9799 | likely_pathogenic | 0.9773 | pathogenic | -2.152 | Highly Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
I/C | 0.9746 | likely_pathogenic | 0.9744 | pathogenic | -1.298 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
I/D | 0.9955 | likely_pathogenic | 0.9946 | pathogenic | -1.626 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
I/E | 0.9915 | likely_pathogenic | 0.9899 | pathogenic | -1.534 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
I/F | 0.8003 | likely_pathogenic | 0.8224 | pathogenic | -1.329 | Destabilizing | 1.0 | D | 0.818 | deleterious | N | 0.520422219 | None | None | N |
I/G | 0.9937 | likely_pathogenic | 0.9925 | pathogenic | -2.58 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
I/H | 0.988 | likely_pathogenic | 0.9876 | pathogenic | -1.71 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
I/K | 0.9737 | likely_pathogenic | 0.9706 | pathogenic | -1.532 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/L | 0.3633 | ambiguous | 0.3747 | ambiguous | -0.991 | Destabilizing | 0.993 | D | 0.413 | neutral | N | 0.512347837 | None | None | N |
I/M | 0.5323 | ambiguous | 0.5381 | ambiguous | -0.758 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.531350906 | None | None | N |
I/N | 0.9307 | likely_pathogenic | 0.9186 | pathogenic | -1.475 | Destabilizing | 1.0 | D | 0.879 | deleterious | N | 0.518375212 | None | None | N |
I/P | 0.9535 | likely_pathogenic | 0.9485 | pathogenic | -1.351 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
I/Q | 0.9849 | likely_pathogenic | 0.9834 | pathogenic | -1.55 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
I/R | 0.9722 | likely_pathogenic | 0.9678 | pathogenic | -0.978 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/S | 0.9757 | likely_pathogenic | 0.9705 | pathogenic | -2.201 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | D | 0.53818776 | None | None | N |
I/T | 0.9599 | likely_pathogenic | 0.9545 | pathogenic | -1.979 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.520083505 | None | None | N |
I/V | 0.1746 | likely_benign | 0.179 | benign | -1.351 | Destabilizing | 0.993 | D | 0.399 | neutral | N | 0.498551821 | None | None | N |
I/W | 0.9923 | likely_pathogenic | 0.9934 | pathogenic | -1.479 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
I/Y | 0.9587 | likely_pathogenic | 0.9593 | pathogenic | -1.261 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.