Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19716 | 59371;59372;59373 | chr2:178592973;178592972;178592971 | chr2:179457700;179457699;179457698 |
N2AB | 18075 | 54448;54449;54450 | chr2:178592973;178592972;178592971 | chr2:179457700;179457699;179457698 |
N2A | 17148 | 51667;51668;51669 | chr2:178592973;178592972;178592971 | chr2:179457700;179457699;179457698 |
N2B | 10651 | 32176;32177;32178 | chr2:178592973;178592972;178592971 | chr2:179457700;179457699;179457698 |
Novex-1 | 10776 | 32551;32552;32553 | chr2:178592973;178592972;178592971 | chr2:179457700;179457699;179457698 |
Novex-2 | 10843 | 32752;32753;32754 | chr2:178592973;178592972;178592971 | chr2:179457700;179457699;179457698 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs763636451 | -2.685 | 0.891 | N | 0.727 | 0.285 | 0.744399525587 | gnomAD-4.0.0 | 2.05289E-06 | None | None | None | None | N | None | 0 | 2.23684E-05 | None | 0 | 0 | None | 0 | 0 | 1.79914E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4037 | ambiguous | 0.4318 | ambiguous | -2.937 | Highly Destabilizing | 0.688 | D | 0.713 | prob.delet. | None | None | None | None | N |
I/C | 0.6643 | likely_pathogenic | 0.7097 | pathogenic | -2.391 | Highly Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
I/D | 0.8672 | likely_pathogenic | 0.8802 | pathogenic | -3.531 | Highly Destabilizing | 0.974 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/E | 0.7308 | likely_pathogenic | 0.7458 | pathogenic | -3.346 | Highly Destabilizing | 0.842 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/F | 0.1566 | likely_benign | 0.1676 | benign | -1.661 | Destabilizing | 0.934 | D | 0.747 | deleterious | N | 0.461068081 | None | None | N |
I/G | 0.8191 | likely_pathogenic | 0.8383 | pathogenic | -3.397 | Highly Destabilizing | 0.974 | D | 0.735 | prob.delet. | None | None | None | None | N |
I/H | 0.4981 | ambiguous | 0.5188 | ambiguous | -2.61 | Highly Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/K | 0.4865 | ambiguous | 0.5103 | ambiguous | -2.271 | Highly Destabilizing | 0.067 | N | 0.665 | neutral | None | None | None | None | N |
I/L | 0.0921 | likely_benign | 0.1001 | benign | -1.599 | Destabilizing | 0.002 | N | 0.249 | neutral | N | 0.421144256 | None | None | N |
I/M | 0.1043 | likely_benign | 0.1059 | benign | -1.74 | Destabilizing | 0.934 | D | 0.738 | prob.delet. | N | 0.469064607 | None | None | N |
I/N | 0.4723 | ambiguous | 0.4891 | ambiguous | -2.585 | Highly Destabilizing | 0.966 | D | 0.742 | deleterious | N | 0.508069807 | None | None | N |
I/P | 0.9813 | likely_pathogenic | 0.9805 | pathogenic | -2.03 | Highly Destabilizing | 0.991 | D | 0.741 | deleterious | None | None | None | None | N |
I/Q | 0.5592 | ambiguous | 0.5834 | pathogenic | -2.526 | Highly Destabilizing | 0.949 | D | 0.742 | deleterious | None | None | None | None | N |
I/R | 0.3859 | ambiguous | 0.3989 | ambiguous | -1.823 | Destabilizing | 0.904 | D | 0.741 | deleterious | None | None | None | None | N |
I/S | 0.4262 | ambiguous | 0.4452 | ambiguous | -3.179 | Highly Destabilizing | 0.801 | D | 0.706 | prob.neutral | N | 0.479459054 | None | None | N |
I/T | 0.2052 | likely_benign | 0.2202 | benign | -2.876 | Highly Destabilizing | 0.891 | D | 0.727 | prob.delet. | N | 0.466857903 | None | None | N |
I/V | 0.0789 | likely_benign | 0.0861 | benign | -2.03 | Highly Destabilizing | 0.267 | N | 0.429 | neutral | N | 0.423915202 | None | None | N |
I/W | 0.6835 | likely_pathogenic | 0.704 | pathogenic | -1.975 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
I/Y | 0.4813 | ambiguous | 0.5033 | ambiguous | -1.84 | Destabilizing | 0.974 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.