Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19719 | 59380;59381;59382 | chr2:178592964;178592963;178592962 | chr2:179457691;179457690;179457689 |
N2AB | 18078 | 54457;54458;54459 | chr2:178592964;178592963;178592962 | chr2:179457691;179457690;179457689 |
N2A | 17151 | 51676;51677;51678 | chr2:178592964;178592963;178592962 | chr2:179457691;179457690;179457689 |
N2B | 10654 | 32185;32186;32187 | chr2:178592964;178592963;178592962 | chr2:179457691;179457690;179457689 |
Novex-1 | 10779 | 32560;32561;32562 | chr2:178592964;178592963;178592962 | chr2:179457691;179457690;179457689 |
Novex-2 | 10846 | 32761;32762;32763 | chr2:178592964;178592963;178592962 | chr2:179457691;179457690;179457689 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | None | None | 0.995 | D | 0.786 | 0.476 | 0.747199188253 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8174 | likely_pathogenic | 0.7965 | pathogenic | -2.601 | Highly Destabilizing | 0.959 | D | 0.723 | prob.delet. | None | None | None | None | N |
Y/C | 0.2484 | likely_benign | 0.2232 | benign | -1.469 | Destabilizing | 0.999 | D | 0.753 | deleterious | N | 0.488176955 | None | None | N |
Y/D | 0.8886 | likely_pathogenic | 0.8895 | pathogenic | -3.361 | Highly Destabilizing | 0.995 | D | 0.786 | deleterious | D | 0.523312736 | None | None | N |
Y/E | 0.9325 | likely_pathogenic | 0.9223 | pathogenic | -3.144 | Highly Destabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
Y/F | 0.1094 | likely_benign | 0.0979 | benign | -0.979 | Destabilizing | 0.026 | N | 0.277 | neutral | N | 0.485086665 | None | None | N |
Y/G | 0.8402 | likely_pathogenic | 0.8264 | pathogenic | -3.007 | Highly Destabilizing | 0.988 | D | 0.749 | deleterious | None | None | None | None | N |
Y/H | 0.4369 | ambiguous | 0.4107 | ambiguous | -1.903 | Destabilizing | 0.995 | D | 0.647 | neutral | N | 0.480761124 | None | None | N |
Y/I | 0.6755 | likely_pathogenic | 0.6201 | pathogenic | -1.248 | Destabilizing | 0.851 | D | 0.675 | neutral | None | None | None | None | N |
Y/K | 0.8556 | likely_pathogenic | 0.8317 | pathogenic | -2.141 | Highly Destabilizing | 0.996 | D | 0.767 | deleterious | None | None | None | None | N |
Y/L | 0.664 | likely_pathogenic | 0.6178 | pathogenic | -1.248 | Destabilizing | 0.034 | N | 0.505 | neutral | None | None | None | None | N |
Y/M | 0.6665 | likely_pathogenic | 0.6078 | pathogenic | -0.996 | Destabilizing | 0.976 | D | 0.741 | deleterious | None | None | None | None | N |
Y/N | 0.6503 | likely_pathogenic | 0.661 | pathogenic | -3.048 | Highly Destabilizing | 0.995 | D | 0.773 | deleterious | N | 0.500435541 | None | None | N |
Y/P | 0.9975 | likely_pathogenic | 0.9972 | pathogenic | -1.714 | Destabilizing | 0.996 | D | 0.791 | deleterious | None | None | None | None | N |
Y/Q | 0.827 | likely_pathogenic | 0.7948 | pathogenic | -2.726 | Highly Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
Y/R | 0.8008 | likely_pathogenic | 0.7711 | pathogenic | -2.127 | Highly Destabilizing | 0.996 | D | 0.771 | deleterious | None | None | None | None | N |
Y/S | 0.6288 | likely_pathogenic | 0.6037 | pathogenic | -3.294 | Highly Destabilizing | 0.984 | D | 0.737 | prob.delet. | N | 0.513793419 | None | None | N |
Y/T | 0.8313 | likely_pathogenic | 0.804 | pathogenic | -2.952 | Highly Destabilizing | 0.988 | D | 0.743 | deleterious | None | None | None | None | N |
Y/V | 0.5697 | likely_pathogenic | 0.5157 | ambiguous | -1.714 | Destabilizing | 0.851 | D | 0.689 | prob.neutral | None | None | None | None | N |
Y/W | 0.5871 | likely_pathogenic | 0.5663 | pathogenic | -0.379 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.