Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19725 | 59398;59399;59400 | chr2:178592946;178592945;178592944 | chr2:179457673;179457672;179457671 |
N2AB | 18084 | 54475;54476;54477 | chr2:178592946;178592945;178592944 | chr2:179457673;179457672;179457671 |
N2A | 17157 | 51694;51695;51696 | chr2:178592946;178592945;178592944 | chr2:179457673;179457672;179457671 |
N2B | 10660 | 32203;32204;32205 | chr2:178592946;178592945;178592944 | chr2:179457673;179457672;179457671 |
Novex-1 | 10785 | 32578;32579;32580 | chr2:178592946;178592945;178592944 | chr2:179457673;179457672;179457671 |
Novex-2 | 10852 | 32779;32780;32781 | chr2:178592946;178592945;178592944 | chr2:179457673;179457672;179457671 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs767601396 | 0.739 | 0.698 | N | 0.604 | 0.263 | 0.339316883193 | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 4.13E-05 | 0 | None | 0 | 5.14E-05 | None | 0 | None | 0 | 2.35E-05 | 0 |
E/K | rs767601396 | 0.739 | 0.698 | N | 0.604 | 0.263 | 0.339316883193 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs767601396 | 0.739 | 0.698 | N | 0.604 | 0.263 | 0.339316883193 | gnomAD-4.0.0 | 1.61151E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23085E-05 | None | 0 | 0 | 1.94979E-05 | 1.09803E-05 | 1.60143E-05 |
E/Q | None | None | 0.294 | N | 0.495 | 0.173 | 0.31291088546 | gnomAD-4.0.0 | 6.84294E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65689E-05 |
E/V | rs1434751540 | 0.385 | 0.971 | N | 0.625 | 0.363 | 0.503186968135 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/V | rs1434751540 | 0.385 | 0.971 | N | 0.625 | 0.363 | 0.503186968135 | gnomAD-4.0.0 | 3.18343E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85938E-06 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1244 | likely_benign | 0.1222 | benign | 0.025 | Stabilizing | 0.822 | D | 0.593 | neutral | N | 0.501936056 | None | None | N |
E/C | 0.7156 | likely_pathogenic | 0.7197 | pathogenic | -0.106 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/D | 0.086 | likely_benign | 0.0847 | benign | -0.297 | Destabilizing | 0.014 | N | 0.44 | neutral | N | 0.423803346 | None | None | N |
E/F | 0.6202 | likely_pathogenic | 0.6451 | pathogenic | -0.101 | Destabilizing | 0.998 | D | 0.662 | neutral | None | None | None | None | N |
E/G | 0.1114 | likely_benign | 0.1105 | benign | -0.07 | Destabilizing | 0.822 | D | 0.505 | neutral | N | 0.435150916 | None | None | N |
E/H | 0.3592 | ambiguous | 0.3545 | ambiguous | 0.486 | Stabilizing | 0.994 | D | 0.645 | neutral | None | None | None | None | N |
E/I | 0.2478 | likely_benign | 0.2475 | benign | 0.214 | Stabilizing | 0.978 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/K | 0.1033 | likely_benign | 0.0968 | benign | 0.437 | Stabilizing | 0.698 | D | 0.604 | neutral | N | 0.493777932 | None | None | N |
E/L | 0.2773 | likely_benign | 0.2783 | benign | 0.214 | Stabilizing | 0.978 | D | 0.665 | neutral | None | None | None | None | N |
E/M | 0.3129 | likely_benign | 0.321 | benign | 0.023 | Stabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | N |
E/N | 0.1717 | likely_benign | 0.1604 | benign | 0.305 | Stabilizing | 0.915 | D | 0.597 | neutral | None | None | None | None | N |
E/P | 0.3272 | likely_benign | 0.3485 | ambiguous | 0.169 | Stabilizing | 0.978 | D | 0.623 | neutral | None | None | None | None | N |
E/Q | 0.1359 | likely_benign | 0.1333 | benign | 0.29 | Stabilizing | 0.294 | N | 0.495 | neutral | N | 0.498914393 | None | None | N |
E/R | 0.1963 | likely_benign | 0.1927 | benign | 0.621 | Stabilizing | 0.956 | D | 0.639 | neutral | None | None | None | None | N |
E/S | 0.1445 | likely_benign | 0.1406 | benign | 0.145 | Stabilizing | 0.86 | D | 0.607 | neutral | None | None | None | None | N |
E/T | 0.1381 | likely_benign | 0.1314 | benign | 0.228 | Stabilizing | 0.956 | D | 0.589 | neutral | None | None | None | None | N |
E/V | 0.1592 | likely_benign | 0.157 | benign | 0.169 | Stabilizing | 0.971 | D | 0.625 | neutral | N | 0.504533644 | None | None | N |
E/W | 0.7814 | likely_pathogenic | 0.8038 | pathogenic | -0.087 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/Y | 0.49 | ambiguous | 0.5029 | ambiguous | 0.118 | Stabilizing | 0.993 | D | 0.635 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.