Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19728 | 59407;59408;59409 | chr2:178592937;178592936;178592935 | chr2:179457664;179457663;179457662 |
N2AB | 18087 | 54484;54485;54486 | chr2:178592937;178592936;178592935 | chr2:179457664;179457663;179457662 |
N2A | 17160 | 51703;51704;51705 | chr2:178592937;178592936;178592935 | chr2:179457664;179457663;179457662 |
N2B | 10663 | 32212;32213;32214 | chr2:178592937;178592936;178592935 | chr2:179457664;179457663;179457662 |
Novex-1 | 10788 | 32587;32588;32589 | chr2:178592937;178592936;178592935 | chr2:179457664;179457663;179457662 |
Novex-2 | 10855 | 32788;32789;32790 | chr2:178592937;178592936;178592935 | chr2:179457664;179457663;179457662 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | None | N | 0.175 | 0.119 | 0.0482279557977 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2673 | likely_benign | 0.2176 | benign | -0.306 | Destabilizing | 0.016 | N | 0.377 | neutral | None | None | None | None | N |
R/C | 0.139 | likely_benign | 0.1425 | benign | -0.387 | Destabilizing | 0.864 | D | 0.382 | neutral | None | None | None | None | N |
R/D | 0.5421 | ambiguous | 0.4848 | ambiguous | -0.146 | Destabilizing | 0.072 | N | 0.424 | neutral | None | None | None | None | N |
R/E | 0.2065 | likely_benign | 0.1727 | benign | 0.005 | Stabilizing | 0.016 | N | 0.395 | neutral | None | None | None | None | N |
R/F | 0.3287 | likely_benign | 0.3179 | benign | -0.032 | Destabilizing | 0.628 | D | 0.401 | neutral | None | None | None | None | N |
R/G | 0.2285 | likely_benign | 0.1753 | benign | -0.617 | Destabilizing | 0.024 | N | 0.421 | neutral | N | 0.496759522 | None | None | N |
R/H | 0.0884 | likely_benign | 0.091 | benign | -1.102 | Destabilizing | 0.356 | N | 0.451 | neutral | None | None | None | None | N |
R/I | 0.1124 | likely_benign | 0.0985 | benign | 0.526 | Stabilizing | 0.171 | N | 0.409 | neutral | N | 0.409793899 | None | None | N |
R/K | 0.0611 | likely_benign | 0.0547 | benign | -0.272 | Destabilizing | None | N | 0.175 | neutral | N | 0.414159568 | None | None | N |
R/L | 0.1282 | likely_benign | 0.1162 | benign | 0.526 | Stabilizing | 0.031 | N | 0.421 | neutral | None | None | None | None | N |
R/M | 0.1368 | likely_benign | 0.1154 | benign | -0.141 | Destabilizing | 0.628 | D | 0.41 | neutral | None | None | None | None | N |
R/N | 0.337 | likely_benign | 0.2878 | benign | -0.146 | Destabilizing | 0.072 | N | 0.355 | neutral | None | None | None | None | N |
R/P | 0.8629 | likely_pathogenic | 0.8024 | pathogenic | 0.27 | Stabilizing | 0.136 | N | 0.417 | neutral | None | None | None | None | N |
R/Q | 0.0753 | likely_benign | 0.0719 | benign | -0.107 | Destabilizing | 0.038 | N | 0.378 | neutral | None | None | None | None | N |
R/S | 0.2927 | likely_benign | 0.2401 | benign | -0.597 | Destabilizing | 0.012 | N | 0.411 | neutral | N | 0.422453765 | None | None | N |
R/T | 0.1298 | likely_benign | 0.1039 | benign | -0.259 | Destabilizing | None | N | 0.244 | neutral | N | 0.426686148 | None | None | N |
R/V | 0.1492 | likely_benign | 0.1284 | benign | 0.27 | Stabilizing | 0.072 | N | 0.414 | neutral | None | None | None | None | N |
R/W | 0.1766 | likely_benign | 0.1611 | benign | 0.1 | Stabilizing | 0.864 | D | 0.394 | neutral | None | None | None | None | N |
R/Y | 0.2895 | likely_benign | 0.2812 | benign | 0.41 | Stabilizing | 0.356 | N | 0.413 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.