Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19738 | 59437;59438;59439 | chr2:178592907;178592906;178592905 | chr2:179457634;179457633;179457632 |
N2AB | 18097 | 54514;54515;54516 | chr2:178592907;178592906;178592905 | chr2:179457634;179457633;179457632 |
N2A | 17170 | 51733;51734;51735 | chr2:178592907;178592906;178592905 | chr2:179457634;179457633;179457632 |
N2B | 10673 | 32242;32243;32244 | chr2:178592907;178592906;178592905 | chr2:179457634;179457633;179457632 |
Novex-1 | 10798 | 32617;32618;32619 | chr2:178592907;178592906;178592905 | chr2:179457634;179457633;179457632 |
Novex-2 | 10865 | 32818;32819;32820 | chr2:178592907;178592906;178592905 | chr2:179457634;179457633;179457632 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs879199918 | None | 0.999 | N | 0.717 | 0.404 | None | gnomAD-4.0.0 | 4.77509E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57814E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0892 | likely_benign | 0.086 | benign | -0.919 | Destabilizing | 0.996 | D | 0.563 | neutral | N | 0.49762074 | None | None | N |
P/C | 0.4526 | ambiguous | 0.4424 | ambiguous | -0.757 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
P/D | 0.4901 | ambiguous | 0.477 | ambiguous | -0.34 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
P/E | 0.2565 | likely_benign | 0.2488 | benign | -0.423 | Destabilizing | 0.994 | D | 0.6 | neutral | None | None | None | None | N |
P/F | 0.4366 | ambiguous | 0.4514 | ambiguous | -0.951 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
P/G | 0.2777 | likely_benign | 0.2696 | benign | -1.116 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
P/H | 0.1983 | likely_benign | 0.1984 | benign | -0.561 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | N | 0.512051475 | None | None | N |
P/I | 0.2254 | likely_benign | 0.2262 | benign | -0.528 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
P/K | 0.1939 | likely_benign | 0.1946 | benign | -0.61 | Destabilizing | 0.994 | D | 0.64 | neutral | None | None | None | None | N |
P/L | 0.1044 | likely_benign | 0.0978 | benign | -0.528 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | N | 0.519516165 | None | None | N |
P/M | 0.2456 | likely_benign | 0.2439 | benign | -0.424 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
P/N | 0.3241 | likely_benign | 0.319 | benign | -0.341 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
P/Q | 0.1353 | likely_benign | 0.1321 | benign | -0.586 | Destabilizing | 0.927 | D | 0.355 | neutral | None | None | None | None | N |
P/R | 0.1454 | likely_benign | 0.1436 | benign | -0.057 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | N | 0.493310998 | None | None | N |
P/S | 0.1332 | likely_benign | 0.127 | benign | -0.836 | Destabilizing | 0.999 | D | 0.666 | neutral | N | 0.487267673 | None | None | N |
P/T | 0.0954 | likely_benign | 0.0903 | benign | -0.81 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | N | 0.483304649 | None | None | N |
P/V | 0.1628 | likely_benign | 0.1597 | benign | -0.622 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
P/W | 0.5693 | likely_pathogenic | 0.5674 | pathogenic | -0.999 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
P/Y | 0.4254 | ambiguous | 0.4297 | ambiguous | -0.715 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.