Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19739 | 59440;59441;59442 | chr2:178592904;178592903;178592902 | chr2:179457631;179457630;179457629 |
N2AB | 18098 | 54517;54518;54519 | chr2:178592904;178592903;178592902 | chr2:179457631;179457630;179457629 |
N2A | 17171 | 51736;51737;51738 | chr2:178592904;178592903;178592902 | chr2:179457631;179457630;179457629 |
N2B | 10674 | 32245;32246;32247 | chr2:178592904;178592903;178592902 | chr2:179457631;179457630;179457629 |
Novex-1 | 10799 | 32620;32621;32622 | chr2:178592904;178592903;178592902 | chr2:179457631;179457630;179457629 |
Novex-2 | 10866 | 32821;32822;32823 | chr2:178592904;178592903;178592902 | chr2:179457631;179457630;179457629 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.565 | N | 0.546 | 0.195 | 0.264081493735 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1268 | likely_benign | 0.1529 | benign | -0.339 | Destabilizing | 0.565 | D | 0.546 | neutral | N | 0.475288172 | None | None | N |
E/C | 0.731 | likely_pathogenic | 0.8093 | pathogenic | -0.329 | Destabilizing | 0.996 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/D | 0.0755 | likely_benign | 0.0946 | benign | -0.439 | Destabilizing | 0.003 | N | 0.097 | neutral | N | 0.442986539 | None | None | N |
E/F | 0.6104 | likely_pathogenic | 0.7055 | pathogenic | -0.056 | Destabilizing | 0.987 | D | 0.655 | neutral | None | None | None | None | N |
E/G | 0.1399 | likely_benign | 0.1581 | benign | -0.559 | Destabilizing | 0.565 | D | 0.557 | neutral | N | 0.479157983 | None | None | N |
E/H | 0.3682 | ambiguous | 0.4332 | ambiguous | 0.304 | Stabilizing | 0.961 | D | 0.529 | neutral | None | None | None | None | N |
E/I | 0.2708 | likely_benign | 0.3398 | benign | 0.217 | Stabilizing | 0.961 | D | 0.652 | neutral | None | None | None | None | N |
E/K | 0.172 | likely_benign | 0.1768 | benign | 0.085 | Stabilizing | 0.722 | D | 0.499 | neutral | N | 0.462879022 | None | None | N |
E/L | 0.311 | likely_benign | 0.3909 | ambiguous | 0.217 | Stabilizing | 0.961 | D | 0.589 | neutral | None | None | None | None | N |
E/M | 0.3743 | ambiguous | 0.4345 | ambiguous | 0.103 | Stabilizing | 0.996 | D | 0.647 | neutral | None | None | None | None | N |
E/N | 0.1452 | likely_benign | 0.1939 | benign | -0.288 | Destabilizing | 0.011 | N | 0.228 | neutral | None | None | None | None | N |
E/P | 0.7382 | likely_pathogenic | 0.7807 | pathogenic | 0.052 | Stabilizing | 0.961 | D | 0.606 | neutral | None | None | None | None | N |
E/Q | 0.1368 | likely_benign | 0.1486 | benign | -0.225 | Destabilizing | 0.722 | D | 0.504 | neutral | N | 0.444639978 | None | None | N |
E/R | 0.2857 | likely_benign | 0.2962 | benign | 0.452 | Stabilizing | 0.923 | D | 0.515 | neutral | None | None | None | None | N |
E/S | 0.146 | likely_benign | 0.1862 | benign | -0.463 | Destabilizing | 0.118 | N | 0.228 | neutral | None | None | None | None | N |
E/T | 0.1679 | likely_benign | 0.2031 | benign | -0.282 | Destabilizing | 0.633 | D | 0.581 | neutral | None | None | None | None | N |
E/V | 0.1711 | likely_benign | 0.2008 | benign | 0.052 | Stabilizing | 0.949 | D | 0.595 | neutral | N | 0.481427497 | None | None | N |
E/W | 0.8594 | likely_pathogenic | 0.8936 | pathogenic | 0.114 | Stabilizing | 0.996 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/Y | 0.4725 | ambiguous | 0.5665 | pathogenic | 0.185 | Stabilizing | 0.987 | D | 0.648 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.