Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19744 | 59455;59456;59457 | chr2:178592889;178592888;178592887 | chr2:179457616;179457615;179457614 |
N2AB | 18103 | 54532;54533;54534 | chr2:178592889;178592888;178592887 | chr2:179457616;179457615;179457614 |
N2A | 17176 | 51751;51752;51753 | chr2:178592889;178592888;178592887 | chr2:179457616;179457615;179457614 |
N2B | 10679 | 32260;32261;32262 | chr2:178592889;178592888;178592887 | chr2:179457616;179457615;179457614 |
Novex-1 | 10804 | 32635;32636;32637 | chr2:178592889;178592888;178592887 | chr2:179457616;179457615;179457614 |
Novex-2 | 10871 | 32836;32837;32838 | chr2:178592889;178592888;178592887 | chr2:179457616;179457615;179457614 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.989 | N | 0.661 | 0.391 | 0.597208634801 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6931 | likely_pathogenic | 0.6479 | pathogenic | -1.602 | Destabilizing | 0.989 | D | 0.661 | neutral | N | 0.478822113 | None | None | N |
V/C | 0.942 | likely_pathogenic | 0.9361 | pathogenic | -1.143 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
V/D | 0.9943 | likely_pathogenic | 0.9913 | pathogenic | -2.351 | Highly Destabilizing | 0.999 | D | 0.849 | deleterious | N | 0.492153428 | None | None | N |
V/E | 0.9789 | likely_pathogenic | 0.9711 | pathogenic | -2.037 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/F | 0.8287 | likely_pathogenic | 0.7726 | pathogenic | -0.879 | Destabilizing | 0.997 | D | 0.795 | deleterious | N | 0.507215809 | None | None | N |
V/G | 0.8989 | likely_pathogenic | 0.8679 | pathogenic | -2.213 | Highly Destabilizing | 0.998 | D | 0.861 | deleterious | D | 0.522374457 | None | None | N |
V/H | 0.9952 | likely_pathogenic | 0.993 | pathogenic | -2.265 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
V/I | 0.1009 | likely_benign | 0.1055 | benign | 0.152 | Stabilizing | 0.543 | D | 0.255 | neutral | N | 0.508651384 | None | None | N |
V/K | 0.9868 | likely_pathogenic | 0.9826 | pathogenic | -1.167 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
V/L | 0.5933 | likely_pathogenic | 0.5861 | pathogenic | 0.152 | Stabilizing | 0.948 | D | 0.419 | neutral | N | 0.491446916 | None | None | N |
V/M | 0.5791 | likely_pathogenic | 0.5249 | ambiguous | -0.12 | Destabilizing | 0.96 | D | 0.493 | neutral | None | None | None | None | N |
V/N | 0.982 | likely_pathogenic | 0.9763 | pathogenic | -1.774 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/P | 0.9875 | likely_pathogenic | 0.9845 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
V/Q | 0.9796 | likely_pathogenic | 0.9727 | pathogenic | -1.389 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
V/R | 0.9828 | likely_pathogenic | 0.9771 | pathogenic | -1.51 | Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
V/S | 0.9477 | likely_pathogenic | 0.9338 | pathogenic | -2.344 | Highly Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
V/T | 0.8769 | likely_pathogenic | 0.8671 | pathogenic | -1.849 | Destabilizing | 0.996 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/W | 0.997 | likely_pathogenic | 0.995 | pathogenic | -1.423 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/Y | 0.9823 | likely_pathogenic | 0.973 | pathogenic | -0.973 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.