Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19763 | 59512;59513;59514 | chr2:178592832;178592831;178592830 | chr2:179457559;179457558;179457557 |
N2AB | 18122 | 54589;54590;54591 | chr2:178592832;178592831;178592830 | chr2:179457559;179457558;179457557 |
N2A | 17195 | 51808;51809;51810 | chr2:178592832;178592831;178592830 | chr2:179457559;179457558;179457557 |
N2B | 10698 | 32317;32318;32319 | chr2:178592832;178592831;178592830 | chr2:179457559;179457558;179457557 |
Novex-1 | 10823 | 32692;32693;32694 | chr2:178592832;178592831;178592830 | chr2:179457559;179457558;179457557 |
Novex-2 | 10890 | 32893;32894;32895 | chr2:178592832;178592831;178592830 | chr2:179457559;179457558;179457557 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs372951248 | -0.406 | 1.0 | N | 0.799 | 0.389 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
A/T | rs372951248 | -0.406 | 1.0 | N | 0.799 | 0.389 | None | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5838 | likely_pathogenic | 0.5822 | pathogenic | -0.754 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
A/D | 0.7968 | likely_pathogenic | 0.7926 | pathogenic | -0.636 | Destabilizing | 1.0 | D | 0.877 | deleterious | N | 0.4851314 | None | None | I |
A/E | 0.6196 | likely_pathogenic | 0.6086 | pathogenic | -0.801 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
A/F | 0.5477 | ambiguous | 0.556 | ambiguous | -0.931 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | I |
A/G | 0.2453 | likely_benign | 0.2553 | benign | -0.274 | Destabilizing | 1.0 | D | 0.633 | neutral | N | 0.472507647 | None | None | I |
A/H | 0.8148 | likely_pathogenic | 0.8252 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
A/I | 0.3206 | likely_benign | 0.331 | benign | -0.382 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
A/K | 0.8351 | likely_pathogenic | 0.8453 | pathogenic | -0.606 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
A/L | 0.4126 | ambiguous | 0.4168 | ambiguous | -0.382 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
A/M | 0.3853 | ambiguous | 0.3818 | ambiguous | -0.409 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
A/N | 0.6487 | likely_pathogenic | 0.6574 | pathogenic | -0.273 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | I |
A/P | 0.9348 | likely_pathogenic | 0.9239 | pathogenic | -0.307 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.523114337 | None | None | I |
A/Q | 0.6704 | likely_pathogenic | 0.6708 | pathogenic | -0.596 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
A/R | 0.7608 | likely_pathogenic | 0.7605 | pathogenic | -0.079 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
A/S | 0.1792 | likely_benign | 0.1839 | benign | -0.441 | Destabilizing | 1.0 | D | 0.637 | neutral | N | 0.47042096 | None | None | I |
A/T | 0.2471 | likely_benign | 0.2476 | benign | -0.536 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.487866878 | None | None | I |
A/V | 0.1561 | likely_benign | 0.1589 | benign | -0.307 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.433940195 | None | None | I |
A/W | 0.933 | likely_pathogenic | 0.9306 | pathogenic | -1.038 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
A/Y | 0.7847 | likely_pathogenic | 0.7863 | pathogenic | -0.702 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.