Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19764 | 59515;59516;59517 | chr2:178592829;178592828;178592827 | chr2:179457556;179457555;179457554 |
N2AB | 18123 | 54592;54593;54594 | chr2:178592829;178592828;178592827 | chr2:179457556;179457555;179457554 |
N2A | 17196 | 51811;51812;51813 | chr2:178592829;178592828;178592827 | chr2:179457556;179457555;179457554 |
N2B | 10699 | 32320;32321;32322 | chr2:178592829;178592828;178592827 | chr2:179457556;179457555;179457554 |
Novex-1 | 10824 | 32695;32696;32697 | chr2:178592829;178592828;178592827 | chr2:179457556;179457555;179457554 |
Novex-2 | 10891 | 32896;32897;32898 | chr2:178592829;178592828;178592827 | chr2:179457556;179457555;179457554 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs1239011047 | None | 0.041 | D | 0.488 | 0.49 | 0.223146558224 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7458 | likely_pathogenic | 0.7496 | pathogenic | -0.642 | Destabilizing | 0.004 | N | 0.433 | neutral | D | 0.541806428 | None | None | I |
G/C | 0.8969 | likely_pathogenic | 0.8944 | pathogenic | -0.968 | Destabilizing | 0.974 | D | 0.877 | deleterious | D | 0.565951071 | None | None | I |
G/D | 0.9277 | likely_pathogenic | 0.9137 | pathogenic | -1.039 | Destabilizing | 0.83 | D | 0.877 | deleterious | D | 0.532082737 | None | None | I |
G/E | 0.9377 | likely_pathogenic | 0.9228 | pathogenic | -1.192 | Destabilizing | 0.866 | D | 0.88 | deleterious | None | None | None | None | I |
G/F | 0.9862 | likely_pathogenic | 0.9827 | pathogenic | -1.265 | Destabilizing | 0.98 | D | 0.887 | deleterious | None | None | None | None | I |
G/H | 0.979 | likely_pathogenic | 0.975 | pathogenic | -0.896 | Destabilizing | 0.98 | D | 0.883 | deleterious | None | None | None | None | I |
G/I | 0.9837 | likely_pathogenic | 0.9791 | pathogenic | -0.663 | Destabilizing | 0.866 | D | 0.877 | deleterious | None | None | None | None | I |
G/K | 0.967 | likely_pathogenic | 0.959 | pathogenic | -1.149 | Destabilizing | 0.764 | D | 0.879 | deleterious | None | None | None | None | I |
G/L | 0.9742 | likely_pathogenic | 0.9691 | pathogenic | -0.663 | Destabilizing | 0.764 | D | 0.871 | deleterious | None | None | None | None | I |
G/M | 0.9811 | likely_pathogenic | 0.976 | pathogenic | -0.504 | Destabilizing | 0.98 | D | 0.881 | deleterious | None | None | None | None | I |
G/N | 0.9549 | likely_pathogenic | 0.9478 | pathogenic | -0.759 | Destabilizing | 0.764 | D | 0.816 | deleterious | None | None | None | None | I |
G/P | 0.9984 | likely_pathogenic | 0.9977 | pathogenic | -0.621 | Destabilizing | 0.866 | D | 0.891 | deleterious | None | None | None | None | I |
G/Q | 0.9487 | likely_pathogenic | 0.938 | pathogenic | -1.098 | Destabilizing | 0.866 | D | 0.889 | deleterious | None | None | None | None | I |
G/R | 0.9256 | likely_pathogenic | 0.9063 | pathogenic | -0.618 | Destabilizing | 0.83 | D | 0.887 | deleterious | D | 0.546832858 | None | None | I |
G/S | 0.6456 | likely_pathogenic | 0.6371 | pathogenic | -0.916 | Destabilizing | 0.041 | N | 0.488 | neutral | D | 0.541299449 | None | None | I |
G/T | 0.9204 | likely_pathogenic | 0.9111 | pathogenic | -1.011 | Destabilizing | 0.764 | D | 0.857 | deleterious | None | None | None | None | I |
G/V | 0.9607 | likely_pathogenic | 0.9504 | pathogenic | -0.621 | Destabilizing | 0.709 | D | 0.871 | deleterious | N | 0.517625787 | None | None | I |
G/W | 0.9742 | likely_pathogenic | 0.9662 | pathogenic | -1.405 | Destabilizing | 0.993 | D | 0.853 | deleterious | None | None | None | None | I |
G/Y | 0.9793 | likely_pathogenic | 0.9754 | pathogenic | -1.084 | Destabilizing | 0.98 | D | 0.889 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.