Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19765 | 59518;59519;59520 | chr2:178592826;178592825;178592824 | chr2:179457553;179457552;179457551 |
N2AB | 18124 | 54595;54596;54597 | chr2:178592826;178592825;178592824 | chr2:179457553;179457552;179457551 |
N2A | 17197 | 51814;51815;51816 | chr2:178592826;178592825;178592824 | chr2:179457553;179457552;179457551 |
N2B | 10700 | 32323;32324;32325 | chr2:178592826;178592825;178592824 | chr2:179457553;179457552;179457551 |
Novex-1 | 10825 | 32698;32699;32700 | chr2:178592826;178592825;178592824 | chr2:179457553;179457552;179457551 |
Novex-2 | 10892 | 32899;32900;32901 | chr2:178592826;178592825;178592824 | chr2:179457553;179457552;179457551 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs766141647 | -0.131 | 1.0 | N | 0.819 | 0.429 | 0.557481709393 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 1.65837E-04 |
E/V | rs766141647 | -0.131 | 1.0 | N | 0.819 | 0.429 | 0.557481709393 | gnomAD-4.0.0 | 8.21192E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 8.11707E-05 | 8.28555E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.154 | likely_benign | 0.1308 | benign | -0.84 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | N | 0.460353218 | None | None | I |
E/C | 0.7928 | likely_pathogenic | 0.7407 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
E/D | 0.2846 | likely_benign | 0.2399 | benign | -0.697 | Destabilizing | 0.999 | D | 0.615 | neutral | N | 0.489251973 | None | None | I |
E/F | 0.6617 | likely_pathogenic | 0.6146 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
E/G | 0.2941 | likely_benign | 0.2322 | benign | -1.143 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.492596457 | None | None | I |
E/H | 0.5772 | likely_pathogenic | 0.4922 | ambiguous | -0.3 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
E/I | 0.211 | likely_benign | 0.1881 | benign | -0.03 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
E/K | 0.1663 | likely_benign | 0.1344 | benign | -0.015 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | N | 0.453061886 | None | None | I |
E/L | 0.3345 | likely_benign | 0.304 | benign | -0.03 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
E/M | 0.3656 | ambiguous | 0.327 | benign | 0.307 | Stabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
E/N | 0.4123 | ambiguous | 0.3414 | ambiguous | -0.608 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
E/P | 0.3725 | ambiguous | 0.3264 | benign | -0.279 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
E/Q | 0.1568 | likely_benign | 0.1362 | benign | -0.517 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | N | 0.449290862 | None | None | I |
E/R | 0.3192 | likely_benign | 0.2548 | benign | 0.264 | Stabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
E/S | 0.282 | likely_benign | 0.2395 | benign | -0.829 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | I |
E/T | 0.23 | likely_benign | 0.2086 | benign | -0.564 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
E/V | 0.1387 | likely_benign | 0.1244 | benign | -0.279 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.424277775 | None | None | I |
E/W | 0.9144 | likely_pathogenic | 0.8752 | pathogenic | 0.037 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
E/Y | 0.6016 | likely_pathogenic | 0.5308 | ambiguous | -0.006 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.