Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19770 | 59533;59534;59535 | chr2:178592811;178592810;178592809 | chr2:179457538;179457537;179457536 |
N2AB | 18129 | 54610;54611;54612 | chr2:178592811;178592810;178592809 | chr2:179457538;179457537;179457536 |
N2A | 17202 | 51829;51830;51831 | chr2:178592811;178592810;178592809 | chr2:179457538;179457537;179457536 |
N2B | 10705 | 32338;32339;32340 | chr2:178592811;178592810;178592809 | chr2:179457538;179457537;179457536 |
Novex-1 | 10830 | 32713;32714;32715 | chr2:178592811;178592810;178592809 | chr2:179457538;179457537;179457536 |
Novex-2 | 10897 | 32914;32915;32916 | chr2:178592811;178592810;178592809 | chr2:179457538;179457537;179457536 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs762714656 | -0.337 | 0.026 | N | 0.319 | 0.118 | 0.170165803431 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
H/R | rs762714656 | -0.337 | 0.026 | N | 0.319 | 0.118 | 0.170165803431 | gnomAD-4.0.0 | 1.59194E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85943E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1251 | likely_benign | 0.1439 | benign | -0.922 | Destabilizing | 0.003 | N | 0.28 | neutral | None | None | None | None | N |
H/C | 0.0995 | likely_benign | 0.1019 | benign | -0.047 | Destabilizing | 0.439 | N | 0.42 | neutral | None | None | None | None | N |
H/D | 0.1149 | likely_benign | 0.1276 | benign | -1.093 | Destabilizing | 0.006 | N | 0.29 | neutral | N | 0.34895051 | None | None | N |
H/E | 0.1544 | likely_benign | 0.1631 | benign | -0.954 | Destabilizing | 0.007 | N | 0.307 | neutral | None | None | None | None | N |
H/F | 0.1228 | likely_benign | 0.1284 | benign | 0.686 | Stabilizing | 0.007 | N | 0.325 | neutral | None | None | None | None | N |
H/G | 0.2146 | likely_benign | 0.2411 | benign | -1.316 | Destabilizing | 0.003 | N | 0.287 | neutral | None | None | None | None | N |
H/I | 0.1373 | likely_benign | 0.1422 | benign | 0.196 | Stabilizing | 0.035 | N | 0.545 | neutral | None | None | None | None | N |
H/K | 0.2021 | likely_benign | 0.2167 | benign | -0.558 | Destabilizing | 0.007 | N | 0.287 | neutral | None | None | None | None | N |
H/L | 0.0816 | likely_benign | 0.0826 | benign | 0.196 | Stabilizing | 0.006 | N | 0.303 | neutral | N | 0.392416072 | None | None | N |
H/M | 0.2179 | likely_benign | 0.2447 | benign | -0.03 | Destabilizing | 0.204 | N | 0.469 | neutral | None | None | None | None | N |
H/N | 0.0652 | likely_benign | 0.0736 | benign | -0.988 | Destabilizing | None | N | 0.139 | neutral | N | 0.380697569 | None | None | N |
H/P | 0.0969 | likely_benign | 0.1085 | benign | -0.16 | Destabilizing | 0.052 | N | 0.566 | neutral | N | 0.358802144 | None | None | N |
H/Q | 0.1198 | likely_benign | 0.1294 | benign | -0.708 | Destabilizing | 0.026 | N | 0.339 | neutral | N | 0.376465185 | None | None | N |
H/R | 0.1205 | likely_benign | 0.1207 | benign | -1.077 | Destabilizing | 0.026 | N | 0.319 | neutral | N | 0.385604743 | None | None | N |
H/S | 0.1089 | likely_benign | 0.1227 | benign | -0.908 | Destabilizing | 0.001 | N | 0.221 | neutral | None | None | None | None | N |
H/T | 0.1209 | likely_benign | 0.1347 | benign | -0.656 | Destabilizing | 0.007 | N | 0.314 | neutral | None | None | None | None | N |
H/V | 0.1056 | likely_benign | 0.1132 | benign | -0.16 | Destabilizing | 0.015 | N | 0.371 | neutral | None | None | None | None | N |
H/W | 0.2341 | likely_benign | 0.2449 | benign | 1.107 | Stabilizing | 0.204 | N | 0.458 | neutral | None | None | None | None | N |
H/Y | 0.0537 | likely_benign | 0.0555 | benign | 1.021 | Stabilizing | None | N | 0.105 | neutral | N | 0.356668703 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.