Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19773 | 59542;59543;59544 | chr2:178592802;178592801;178592800 | chr2:179457529;179457528;179457527 |
N2AB | 18132 | 54619;54620;54621 | chr2:178592802;178592801;178592800 | chr2:179457529;179457528;179457527 |
N2A | 17205 | 51838;51839;51840 | chr2:178592802;178592801;178592800 | chr2:179457529;179457528;179457527 |
N2B | 10708 | 32347;32348;32349 | chr2:178592802;178592801;178592800 | chr2:179457529;179457528;179457527 |
Novex-1 | 10833 | 32722;32723;32724 | chr2:178592802;178592801;178592800 | chr2:179457529;179457528;179457527 |
Novex-2 | 10900 | 32923;32924;32925 | chr2:178592802;178592801;178592800 | chr2:179457529;179457528;179457527 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.877 | N | 0.586 | 0.351 | 0.3571064206 | gnomAD-4.0.0 | 6.84345E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99585E-07 | 0 | 0 |
E/G | rs371719028 | -0.092 | 0.877 | N | 0.455 | 0.261 | None | gnomAD-2.1.1 | 2.21626E-04 | None | None | None | None | I | None | 2.56241E-03 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs371719028 | -0.092 | 0.877 | N | 0.455 | 0.261 | None | gnomAD-3.1.2 | 7.23275E-04 | None | None | None | None | I | None | 2.58192E-03 | 1.96567E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs371719028 | -0.092 | 0.877 | N | 0.455 | 0.261 | None | 1000 genomes | 5.99042E-04 | None | None | None | None | I | None | 2.3E-03 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
E/G | rs371719028 | -0.092 | 0.877 | N | 0.455 | 0.261 | None | gnomAD-4.0.0 | 1.19619E-04 | None | None | None | None | I | None | 2.46621E-03 | 5.00167E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 8.00384E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1244 | likely_benign | 0.1191 | benign | -0.082 | Destabilizing | 0.877 | D | 0.586 | neutral | N | 0.472477513 | None | None | I |
E/C | 0.7241 | likely_pathogenic | 0.7044 | pathogenic | -0.375 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
E/D | 0.0687 | likely_benign | 0.0677 | benign | -0.355 | Destabilizing | 0.009 | N | 0.162 | neutral | N | 0.461046651 | None | None | I |
E/F | 0.5833 | likely_pathogenic | 0.5757 | pathogenic | -0.106 | Destabilizing | 0.999 | D | 0.653 | prob.neutral | None | None | None | None | I |
E/G | 0.1174 | likely_benign | 0.11 | benign | -0.2 | Destabilizing | 0.877 | D | 0.455 | neutral | N | 0.479632412 | None | None | I |
E/H | 0.3422 | ambiguous | 0.3259 | benign | 0.573 | Stabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
E/I | 0.2791 | likely_benign | 0.2649 | benign | 0.175 | Stabilizing | 0.985 | D | 0.693 | prob.delet. | None | None | None | None | I |
E/K | 0.1329 | likely_benign | 0.1254 | benign | 0.246 | Stabilizing | 0.877 | D | 0.556 | neutral | N | 0.465426848 | None | None | I |
E/L | 0.28 | likely_benign | 0.2697 | benign | 0.175 | Stabilizing | 0.985 | D | 0.692 | prob.delet. | None | None | None | None | I |
E/M | 0.3621 | ambiguous | 0.3482 | ambiguous | -0.141 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | I |
E/N | 0.1388 | likely_benign | 0.1315 | benign | 0.008 | Stabilizing | 0.943 | D | 0.62 | neutral | None | None | None | None | I |
E/P | 0.4048 | ambiguous | 0.4186 | ambiguous | 0.107 | Stabilizing | 0.985 | D | 0.649 | prob.neutral | None | None | None | None | I |
E/Q | 0.1203 | likely_benign | 0.1159 | benign | 0.019 | Stabilizing | 0.981 | D | 0.623 | neutral | N | 0.500930404 | None | None | I |
E/R | 0.2387 | likely_benign | 0.2301 | benign | 0.562 | Stabilizing | 0.985 | D | 0.676 | prob.neutral | None | None | None | None | I |
E/S | 0.1314 | likely_benign | 0.1267 | benign | -0.141 | Destabilizing | 0.904 | D | 0.551 | neutral | None | None | None | None | I |
E/T | 0.1594 | likely_benign | 0.1555 | benign | -0.038 | Destabilizing | 0.971 | D | 0.607 | neutral | None | None | None | None | I |
E/V | 0.1707 | likely_benign | 0.1632 | benign | 0.107 | Stabilizing | 0.981 | D | 0.631 | neutral | N | 0.4763254 | None | None | I |
E/W | 0.8232 | likely_pathogenic | 0.8126 | pathogenic | -0.054 | Destabilizing | 0.999 | D | 0.687 | prob.delet. | None | None | None | None | I |
E/Y | 0.4513 | ambiguous | 0.4373 | ambiguous | 0.113 | Stabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.