Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19777 | 59554;59555;59556 | chr2:178592790;178592789;178592788 | chr2:179457517;179457516;179457515 |
N2AB | 18136 | 54631;54632;54633 | chr2:178592790;178592789;178592788 | chr2:179457517;179457516;179457515 |
N2A | 17209 | 51850;51851;51852 | chr2:178592790;178592789;178592788 | chr2:179457517;179457516;179457515 |
N2B | 10712 | 32359;32360;32361 | chr2:178592790;178592789;178592788 | chr2:179457517;179457516;179457515 |
Novex-1 | 10837 | 32734;32735;32736 | chr2:178592790;178592789;178592788 | chr2:179457517;179457516;179457515 |
Novex-2 | 10904 | 32935;32936;32937 | chr2:178592790;178592789;178592788 | chr2:179457517;179457516;179457515 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1178263259 | None | 0.051 | N | 0.309 | 0.14 | 0.483596354421 | gnomAD-4.0.0 | 2.05309E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69876E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3783 | ambiguous | 0.3759 | ambiguous | -2.326 | Highly Destabilizing | 0.005 | N | 0.305 | neutral | N | 0.43805044 | None | None | N |
V/C | 0.8586 | likely_pathogenic | 0.8593 | pathogenic | -2.533 | Highly Destabilizing | 0.998 | D | 0.696 | prob.delet. | None | None | None | None | N |
V/D | 0.9917 | likely_pathogenic | 0.991 | pathogenic | -3.515 | Highly Destabilizing | 0.974 | D | 0.817 | deleterious | None | None | None | None | N |
V/E | 0.9767 | likely_pathogenic | 0.9747 | pathogenic | -3.3 | Highly Destabilizing | 0.933 | D | 0.733 | deleterious | N | 0.507470796 | None | None | N |
V/F | 0.8992 | likely_pathogenic | 0.892 | pathogenic | -1.278 | Destabilizing | 0.974 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/G | 0.7296 | likely_pathogenic | 0.7314 | pathogenic | -2.796 | Highly Destabilizing | 0.666 | D | 0.776 | deleterious | N | 0.517559653 | None | None | N |
V/H | 0.994 | likely_pathogenic | 0.9929 | pathogenic | -2.354 | Highly Destabilizing | 0.998 | D | 0.804 | deleterious | None | None | None | None | N |
V/I | 0.163 | likely_benign | 0.1458 | benign | -0.994 | Destabilizing | 0.051 | N | 0.309 | neutral | N | 0.486129602 | None | None | N |
V/K | 0.9833 | likely_pathogenic | 0.9822 | pathogenic | -1.932 | Destabilizing | 0.949 | D | 0.743 | deleterious | None | None | None | None | N |
V/L | 0.5752 | likely_pathogenic | 0.5821 | pathogenic | -0.994 | Destabilizing | 0.451 | N | 0.518 | neutral | N | 0.492819126 | None | None | N |
V/M | 0.6801 | likely_pathogenic | 0.6678 | pathogenic | -1.5 | Destabilizing | 0.974 | D | 0.616 | neutral | None | None | None | None | N |
V/N | 0.9584 | likely_pathogenic | 0.954 | pathogenic | -2.453 | Highly Destabilizing | 0.974 | D | 0.807 | deleterious | None | None | None | None | N |
V/P | 0.6027 | likely_pathogenic | 0.58 | pathogenic | -1.417 | Destabilizing | 0.974 | D | 0.767 | deleterious | None | None | None | None | N |
V/Q | 0.9652 | likely_pathogenic | 0.9627 | pathogenic | -2.296 | Highly Destabilizing | 0.974 | D | 0.757 | deleterious | None | None | None | None | N |
V/R | 0.9657 | likely_pathogenic | 0.9641 | pathogenic | -1.745 | Destabilizing | 0.974 | D | 0.811 | deleterious | None | None | None | None | N |
V/S | 0.7902 | likely_pathogenic | 0.7792 | pathogenic | -2.94 | Highly Destabilizing | 0.725 | D | 0.72 | deleterious | None | None | None | None | N |
V/T | 0.6976 | likely_pathogenic | 0.682 | pathogenic | -2.596 | Highly Destabilizing | 0.841 | D | 0.583 | neutral | None | None | None | None | N |
V/W | 0.9981 | likely_pathogenic | 0.9975 | pathogenic | -1.739 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
V/Y | 0.9914 | likely_pathogenic | 0.9899 | pathogenic | -1.496 | Destabilizing | 0.991 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.