Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19800 | 59623;59624;59625 | chr2:178592607;178592606;178592605 | chr2:179457334;179457333;179457332 |
N2AB | 18159 | 54700;54701;54702 | chr2:178592607;178592606;178592605 | chr2:179457334;179457333;179457332 |
N2A | 17232 | 51919;51920;51921 | chr2:178592607;178592606;178592605 | chr2:179457334;179457333;179457332 |
N2B | 10735 | 32428;32429;32430 | chr2:178592607;178592606;178592605 | chr2:179457334;179457333;179457332 |
Novex-1 | 10860 | 32803;32804;32805 | chr2:178592607;178592606;178592605 | chr2:179457334;179457333;179457332 |
Novex-2 | 10927 | 33004;33005;33006 | chr2:178592607;178592606;178592605 | chr2:179457334;179457333;179457332 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs747359962 | None | 0.002 | N | 0.111 | 0.131 | 0.247322355667 | gnomAD-4.0.0 | 1.02654E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.34938E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0762 | likely_benign | 0.0674 | benign | -1.051 | Destabilizing | 0.002 | N | 0.111 | neutral | N | 0.358084494 | None | None | N |
V/C | 0.69 | likely_pathogenic | 0.6656 | pathogenic | -0.743 | Destabilizing | 0.974 | D | 0.325 | neutral | None | None | None | None | N |
V/D | 0.3607 | ambiguous | 0.3513 | ambiguous | -0.743 | Destabilizing | 0.966 | D | 0.417 | neutral | N | 0.482800429 | None | None | N |
V/E | 0.2429 | likely_benign | 0.2272 | benign | -0.817 | Destabilizing | 0.842 | D | 0.385 | neutral | None | None | None | None | N |
V/F | 0.2701 | likely_benign | 0.2495 | benign | -1.006 | Destabilizing | 0.966 | D | 0.365 | neutral | N | 0.512429903 | None | None | N |
V/G | 0.2031 | likely_benign | 0.1918 | benign | -1.277 | Destabilizing | 0.454 | N | 0.361 | neutral | N | 0.49886596 | None | None | N |
V/H | 0.5488 | ambiguous | 0.5246 | ambiguous | -0.774 | Destabilizing | 0.998 | D | 0.397 | neutral | None | None | None | None | N |
V/I | 0.0994 | likely_benign | 0.0872 | benign | -0.574 | Destabilizing | 0.625 | D | 0.365 | neutral | N | 0.471794002 | None | None | N |
V/K | 0.2663 | likely_benign | 0.2458 | benign | -0.864 | Destabilizing | 0.842 | D | 0.405 | neutral | None | None | None | None | N |
V/L | 0.2837 | likely_benign | 0.2467 | benign | -0.574 | Destabilizing | 0.625 | D | 0.316 | neutral | N | 0.459518138 | None | None | N |
V/M | 0.1683 | likely_benign | 0.1416 | benign | -0.41 | Destabilizing | 0.991 | D | 0.337 | neutral | None | None | None | None | N |
V/N | 0.2629 | likely_benign | 0.2313 | benign | -0.561 | Destabilizing | 0.974 | D | 0.433 | neutral | None | None | None | None | N |
V/P | 0.5465 | ambiguous | 0.5238 | ambiguous | -0.697 | Destabilizing | 0.974 | D | 0.404 | neutral | None | None | None | None | N |
V/Q | 0.2806 | likely_benign | 0.2576 | benign | -0.813 | Destabilizing | 0.974 | D | 0.411 | neutral | None | None | None | None | N |
V/R | 0.2441 | likely_benign | 0.2413 | benign | -0.275 | Destabilizing | 0.974 | D | 0.421 | neutral | None | None | None | None | N |
V/S | 0.1523 | likely_benign | 0.1297 | benign | -1.017 | Destabilizing | 0.525 | D | 0.325 | neutral | None | None | None | None | N |
V/T | 0.1286 | likely_benign | 0.1078 | benign | -0.988 | Destabilizing | 0.688 | D | 0.28 | neutral | None | None | None | None | N |
V/W | 0.8494 | likely_pathogenic | 0.8424 | pathogenic | -1.098 | Destabilizing | 0.998 | D | 0.474 | neutral | None | None | None | None | N |
V/Y | 0.5927 | likely_pathogenic | 0.5712 | pathogenic | -0.822 | Destabilizing | 0.991 | D | 0.348 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.