Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19804 | 59635;59636;59637 | chr2:178592595;178592594;178592593 | chr2:179457322;179457321;179457320 |
N2AB | 18163 | 54712;54713;54714 | chr2:178592595;178592594;178592593 | chr2:179457322;179457321;179457320 |
N2A | 17236 | 51931;51932;51933 | chr2:178592595;178592594;178592593 | chr2:179457322;179457321;179457320 |
N2B | 10739 | 32440;32441;32442 | chr2:178592595;178592594;178592593 | chr2:179457322;179457321;179457320 |
Novex-1 | 10864 | 32815;32816;32817 | chr2:178592595;178592594;178592593 | chr2:179457322;179457321;179457320 |
Novex-2 | 10931 | 33016;33017;33018 | chr2:178592595;178592594;178592593 | chr2:179457322;179457321;179457320 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.97 | N | 0.741 | 0.536 | 0.649577115175 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9038 | likely_pathogenic | 0.9012 | pathogenic | -2.752 | Highly Destabilizing | 0.86 | D | 0.66 | neutral | None | None | None | None | N |
L/C | 0.8852 | likely_pathogenic | 0.8786 | pathogenic | -2.042 | Highly Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/D | 0.9988 | likely_pathogenic | 0.9991 | pathogenic | -3.218 | Highly Destabilizing | 0.993 | D | 0.796 | deleterious | None | None | None | None | N |
L/E | 0.9925 | likely_pathogenic | 0.994 | pathogenic | -2.987 | Highly Destabilizing | 0.978 | D | 0.803 | deleterious | None | None | None | None | N |
L/F | 0.5882 | likely_pathogenic | 0.5574 | ambiguous | -1.716 | Destabilizing | 0.915 | D | 0.703 | prob.neutral | None | None | None | None | N |
L/G | 0.9872 | likely_pathogenic | 0.989 | pathogenic | -3.295 | Highly Destabilizing | 0.978 | D | 0.791 | deleterious | None | None | None | None | N |
L/H | 0.9779 | likely_pathogenic | 0.9818 | pathogenic | -2.604 | Highly Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
L/I | 0.1564 | likely_benign | 0.1227 | benign | -1.176 | Destabilizing | 0.058 | N | 0.247 | neutral | N | 0.425117563 | None | None | N |
L/K | 0.9827 | likely_pathogenic | 0.9878 | pathogenic | -2.388 | Highly Destabilizing | 0.978 | D | 0.775 | deleterious | None | None | None | None | N |
L/M | 0.2893 | likely_benign | 0.2564 | benign | -1.028 | Destabilizing | 0.978 | D | 0.66 | neutral | None | None | None | None | N |
L/N | 0.992 | likely_pathogenic | 0.9935 | pathogenic | -2.763 | Highly Destabilizing | 0.993 | D | 0.796 | deleterious | None | None | None | None | N |
L/P | 0.9845 | likely_pathogenic | 0.9904 | pathogenic | -1.684 | Destabilizing | 0.99 | D | 0.791 | deleterious | N | 0.491348101 | None | None | N |
L/Q | 0.9623 | likely_pathogenic | 0.9684 | pathogenic | -2.647 | Highly Destabilizing | 0.99 | D | 0.753 | deleterious | N | 0.502704406 | None | None | N |
L/R | 0.9703 | likely_pathogenic | 0.9793 | pathogenic | -1.991 | Destabilizing | 0.97 | D | 0.741 | deleterious | N | 0.502450917 | None | None | N |
L/S | 0.9848 | likely_pathogenic | 0.9859 | pathogenic | -3.428 | Highly Destabilizing | 0.978 | D | 0.76 | deleterious | None | None | None | None | N |
L/T | 0.935 | likely_pathogenic | 0.9383 | pathogenic | -3.046 | Highly Destabilizing | 0.926 | D | 0.747 | deleterious | None | None | None | None | N |
L/V | 0.1865 | likely_benign | 0.1563 | benign | -1.684 | Destabilizing | 0.489 | N | 0.563 | neutral | N | 0.452992023 | None | None | N |
L/W | 0.9285 | likely_pathogenic | 0.9454 | pathogenic | -2.07 | Highly Destabilizing | 0.043 | N | 0.565 | neutral | None | None | None | None | N |
L/Y | 0.949 | likely_pathogenic | 0.9534 | pathogenic | -1.803 | Destabilizing | 0.915 | D | 0.788 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.