Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19807 | 59644;59645;59646 | chr2:178592586;178592585;178592584 | chr2:179457313;179457312;179457311 |
N2AB | 18166 | 54721;54722;54723 | chr2:178592586;178592585;178592584 | chr2:179457313;179457312;179457311 |
N2A | 17239 | 51940;51941;51942 | chr2:178592586;178592585;178592584 | chr2:179457313;179457312;179457311 |
N2B | 10742 | 32449;32450;32451 | chr2:178592586;178592585;178592584 | chr2:179457313;179457312;179457311 |
Novex-1 | 10867 | 32824;32825;32826 | chr2:178592586;178592585;178592584 | chr2:179457313;179457312;179457311 |
Novex-2 | 10934 | 33025;33026;33027 | chr2:178592586;178592585;178592584 | chr2:179457313;179457312;179457311 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.994 | N | 0.593 | 0.479 | 0.517322629239 | gnomAD-4.0.0 | 6.84331E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9958E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1444 | likely_benign | 0.1438 | benign | -0.793 | Destabilizing | 0.931 | D | 0.447 | neutral | None | None | None | None | N |
S/C | 0.2096 | likely_benign | 0.2074 | benign | -0.424 | Destabilizing | 1.0 | D | 0.643 | neutral | N | 0.495318023 | None | None | N |
S/D | 0.7878 | likely_pathogenic | 0.8084 | pathogenic | -0.12 | Destabilizing | 0.995 | D | 0.485 | neutral | None | None | None | None | N |
S/E | 0.7994 | likely_pathogenic | 0.8271 | pathogenic | -0.099 | Destabilizing | 0.995 | D | 0.471 | neutral | None | None | None | None | N |
S/F | 0.4319 | ambiguous | 0.4109 | ambiguous | -0.932 | Destabilizing | 0.991 | D | 0.665 | neutral | None | None | None | None | N |
S/G | 0.2157 | likely_benign | 0.2278 | benign | -1.072 | Destabilizing | 0.98 | D | 0.469 | neutral | N | 0.501305504 | None | None | N |
S/H | 0.5756 | likely_pathogenic | 0.5901 | pathogenic | -1.506 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
S/I | 0.4866 | ambiguous | 0.4939 | ambiguous | -0.15 | Destabilizing | 0.925 | D | 0.59 | neutral | D | 0.528557801 | None | None | N |
S/K | 0.9367 | likely_pathogenic | 0.9409 | pathogenic | -0.622 | Destabilizing | 0.985 | D | 0.444 | neutral | None | None | None | None | N |
S/L | 0.2447 | likely_benign | 0.2302 | benign | -0.15 | Destabilizing | 0.871 | D | 0.497 | neutral | None | None | None | None | N |
S/M | 0.3515 | ambiguous | 0.3418 | ambiguous | 0.11 | Stabilizing | 0.559 | D | 0.338 | neutral | None | None | None | None | N |
S/N | 0.3696 | ambiguous | 0.3758 | ambiguous | -0.616 | Destabilizing | 0.993 | D | 0.508 | neutral | N | 0.490652774 | None | None | N |
S/P | 0.8575 | likely_pathogenic | 0.9024 | pathogenic | -0.33 | Destabilizing | 0.999 | D | 0.598 | neutral | None | None | None | None | N |
S/Q | 0.7211 | likely_pathogenic | 0.7484 | pathogenic | -0.685 | Destabilizing | 0.996 | D | 0.515 | neutral | None | None | None | None | N |
S/R | 0.8892 | likely_pathogenic | 0.9014 | pathogenic | -0.599 | Destabilizing | 0.994 | D | 0.593 | neutral | N | 0.495559949 | None | None | N |
S/T | 0.1553 | likely_benign | 0.1568 | benign | -0.625 | Destabilizing | 0.98 | D | 0.495 | neutral | N | 0.46642912 | None | None | N |
S/V | 0.4338 | ambiguous | 0.441 | ambiguous | -0.33 | Destabilizing | 0.942 | D | 0.556 | neutral | None | None | None | None | N |
S/W | 0.4765 | ambiguous | 0.5169 | ambiguous | -0.924 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
S/Y | 0.3549 | ambiguous | 0.352 | ambiguous | -0.65 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.