Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19810 | 59653;59654;59655 | chr2:178592577;178592576;178592575 | chr2:179457304;179457303;179457302 |
N2AB | 18169 | 54730;54731;54732 | chr2:178592577;178592576;178592575 | chr2:179457304;179457303;179457302 |
N2A | 17242 | 51949;51950;51951 | chr2:178592577;178592576;178592575 | chr2:179457304;179457303;179457302 |
N2B | 10745 | 32458;32459;32460 | chr2:178592577;178592576;178592575 | chr2:179457304;179457303;179457302 |
Novex-1 | 10870 | 32833;32834;32835 | chr2:178592577;178592576;178592575 | chr2:179457304;179457303;179457302 |
Novex-2 | 10937 | 33034;33035;33036 | chr2:178592577;178592576;178592575 | chr2:179457304;179457303;179457302 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 0.998 | D | 0.816 | 0.658 | 0.865813452579 | gnomAD-4.0.0 | 1.59192E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85948E-06 | 0 | 0 |
I/V | None | None | 0.333 | N | 0.188 | 0.173 | 0.485493271093 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9634 | likely_pathogenic | 0.9596 | pathogenic | -1.762 | Destabilizing | 0.992 | D | 0.681 | prob.neutral | None | None | None | None | N |
I/C | 0.95 | likely_pathogenic | 0.9386 | pathogenic | -1.088 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
I/D | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -1.104 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
I/E | 0.9965 | likely_pathogenic | 0.9966 | pathogenic | -0.944 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
I/F | 0.6285 | likely_pathogenic | 0.5439 | ambiguous | -0.91 | Destabilizing | 0.998 | D | 0.762 | deleterious | N | 0.518132951 | None | None | N |
I/G | 0.9932 | likely_pathogenic | 0.9929 | pathogenic | -2.228 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
I/H | 0.9917 | likely_pathogenic | 0.9908 | pathogenic | -1.412 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
I/K | 0.9869 | likely_pathogenic | 0.9869 | pathogenic | -1.169 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
I/L | 0.325 | likely_benign | 0.2812 | benign | -0.478 | Destabilizing | 0.889 | D | 0.399 | neutral | N | 0.513495135 | None | None | N |
I/M | 0.4335 | ambiguous | 0.3741 | ambiguous | -0.466 | Destabilizing | 0.998 | D | 0.724 | prob.delet. | N | 0.50233637 | None | None | N |
I/N | 0.9867 | likely_pathogenic | 0.9865 | pathogenic | -1.333 | Destabilizing | 0.999 | D | 0.84 | deleterious | N | 0.517820505 | None | None | N |
I/P | 0.987 | likely_pathogenic | 0.9888 | pathogenic | -0.88 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
I/Q | 0.988 | likely_pathogenic | 0.9878 | pathogenic | -1.244 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
I/R | 0.9785 | likely_pathogenic | 0.9781 | pathogenic | -0.885 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
I/S | 0.9747 | likely_pathogenic | 0.9744 | pathogenic | -2.09 | Highly Destabilizing | 0.998 | D | 0.816 | deleterious | D | 0.525482998 | None | None | N |
I/T | 0.9493 | likely_pathogenic | 0.9425 | pathogenic | -1.782 | Destabilizing | 0.989 | D | 0.767 | deleterious | D | 0.527405795 | None | None | N |
I/V | 0.1878 | likely_benign | 0.1648 | benign | -0.88 | Destabilizing | 0.333 | N | 0.188 | neutral | N | 0.427865158 | None | None | N |
I/W | 0.9803 | likely_pathogenic | 0.9778 | pathogenic | -1.126 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
I/Y | 0.9605 | likely_pathogenic | 0.9505 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.