Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19815 | 59668;59669;59670 | chr2:178592562;178592561;178592560 | chr2:179457289;179457288;179457287 |
N2AB | 18174 | 54745;54746;54747 | chr2:178592562;178592561;178592560 | chr2:179457289;179457288;179457287 |
N2A | 17247 | 51964;51965;51966 | chr2:178592562;178592561;178592560 | chr2:179457289;179457288;179457287 |
N2B | 10750 | 32473;32474;32475 | chr2:178592562;178592561;178592560 | chr2:179457289;179457288;179457287 |
Novex-1 | 10875 | 32848;32849;32850 | chr2:178592562;178592561;178592560 | chr2:179457289;179457288;179457287 |
Novex-2 | 10942 | 33049;33050;33051 | chr2:178592562;178592561;178592560 | chr2:179457289;179457288;179457287 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.999 | N | 0.614 | 0.395 | 0.568180043242 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.58 | likely_pathogenic | 0.58 | pathogenic | -2.07 | Highly Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
F/C | 0.498 | ambiguous | 0.4134 | ambiguous | -0.913 | Destabilizing | 1.0 | D | 0.668 | neutral | N | 0.4949984 | None | None | I |
F/D | 0.842 | likely_pathogenic | 0.8686 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
F/E | 0.8375 | likely_pathogenic | 0.866 | pathogenic | -0.65 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
F/G | 0.8858 | likely_pathogenic | 0.8898 | pathogenic | -2.402 | Highly Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
F/H | 0.6565 | likely_pathogenic | 0.6558 | pathogenic | -0.777 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
F/I | 0.3264 | likely_benign | 0.2845 | benign | -1.081 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | N | 0.447555358 | None | None | I |
F/K | 0.837 | likely_pathogenic | 0.8675 | pathogenic | -1.081 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
F/L | 0.8685 | likely_pathogenic | 0.8446 | pathogenic | -1.081 | Destabilizing | 0.999 | D | 0.614 | neutral | N | 0.460599226 | None | None | I |
F/M | 0.5733 | likely_pathogenic | 0.5503 | ambiguous | -0.73 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
F/N | 0.6749 | likely_pathogenic | 0.6817 | pathogenic | -1.089 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | I |
F/P | 0.8537 | likely_pathogenic | 0.851 | pathogenic | -1.403 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
F/Q | 0.7574 | likely_pathogenic | 0.7803 | pathogenic | -1.157 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
F/R | 0.7666 | likely_pathogenic | 0.7928 | pathogenic | -0.471 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | I |
F/S | 0.4779 | ambiguous | 0.4742 | ambiguous | -1.872 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | N | 0.472469658 | None | None | I |
F/T | 0.5808 | likely_pathogenic | 0.5715 | pathogenic | -1.701 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
F/V | 0.2903 | likely_benign | 0.2595 | benign | -1.403 | Destabilizing | 1.0 | D | 0.658 | neutral | N | 0.465447685 | None | None | I |
F/W | 0.6602 | likely_pathogenic | 0.6613 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
F/Y | 0.2029 | likely_benign | 0.1931 | benign | -0.555 | Destabilizing | 0.999 | D | 0.605 | neutral | N | 0.504832793 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.