Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19846 | 59761;59762;59763 | chr2:178592469;178592468;178592467 | chr2:179457196;179457195;179457194 |
N2AB | 18205 | 54838;54839;54840 | chr2:178592469;178592468;178592467 | chr2:179457196;179457195;179457194 |
N2A | 17278 | 52057;52058;52059 | chr2:178592469;178592468;178592467 | chr2:179457196;179457195;179457194 |
N2B | 10781 | 32566;32567;32568 | chr2:178592469;178592468;178592467 | chr2:179457196;179457195;179457194 |
Novex-1 | 10906 | 32941;32942;32943 | chr2:178592469;178592468;178592467 | chr2:179457196;179457195;179457194 |
Novex-2 | 10973 | 33142;33143;33144 | chr2:178592469;178592468;178592467 | chr2:179457196;179457195;179457194 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs749738999 | -0.614 | 0.976 | N | 0.339 | 0.252 | 0.194818534648 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
N/H | rs749738999 | -0.614 | 0.976 | N | 0.339 | 0.252 | 0.194818534648 | gnomAD-4.0.0 | 3.18366E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71873E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.278 | likely_benign | 0.2491 | benign | -0.35 | Destabilizing | 0.863 | D | 0.357 | neutral | None | None | None | None | N |
N/C | 0.3575 | ambiguous | 0.3252 | benign | 0.431 | Stabilizing | 0.999 | D | 0.363 | neutral | None | None | None | None | N |
N/D | 0.1057 | likely_benign | 0.1046 | benign | -0.072 | Destabilizing | 0.852 | D | 0.287 | neutral | N | 0.46290516 | None | None | N |
N/E | 0.2953 | likely_benign | 0.2936 | benign | -0.116 | Destabilizing | 0.17 | N | 0.187 | neutral | None | None | None | None | N |
N/F | 0.5605 | ambiguous | 0.5125 | ambiguous | -0.754 | Destabilizing | 0.02 | N | 0.213 | neutral | None | None | None | None | N |
N/G | 0.2483 | likely_benign | 0.2267 | benign | -0.515 | Destabilizing | 0.927 | D | 0.257 | neutral | None | None | None | None | N |
N/H | 0.1233 | likely_benign | 0.1169 | benign | -0.618 | Destabilizing | 0.976 | D | 0.339 | neutral | N | 0.498097956 | None | None | N |
N/I | 0.4414 | ambiguous | 0.4138 | ambiguous | -0.005 | Destabilizing | 0.92 | D | 0.421 | neutral | N | 0.464066814 | None | None | N |
N/K | 0.3081 | likely_benign | 0.2954 | benign | 0.14 | Stabilizing | 0.92 | D | 0.255 | neutral | N | 0.438817579 | None | None | N |
N/L | 0.344 | ambiguous | 0.3233 | benign | -0.005 | Destabilizing | 0.884 | D | 0.403 | neutral | None | None | None | None | N |
N/M | 0.4103 | ambiguous | 0.3718 | ambiguous | 0.496 | Stabilizing | 0.997 | D | 0.353 | neutral | None | None | None | None | N |
N/P | 0.742 | likely_pathogenic | 0.7389 | pathogenic | -0.094 | Destabilizing | 0.997 | D | 0.384 | neutral | None | None | None | None | N |
N/Q | 0.3064 | likely_benign | 0.2906 | benign | -0.355 | Destabilizing | 0.982 | D | 0.316 | neutral | None | None | None | None | N |
N/R | 0.3685 | ambiguous | 0.3612 | ambiguous | 0.226 | Stabilizing | 0.939 | D | 0.33 | neutral | None | None | None | None | N |
N/S | 0.1134 | likely_benign | 0.1067 | benign | -0.062 | Destabilizing | 0.826 | D | 0.294 | neutral | N | 0.465580106 | None | None | N |
N/T | 0.2146 | likely_benign | 0.2007 | benign | 0.03 | Stabilizing | 0.959 | D | 0.263 | neutral | N | 0.498097956 | None | None | N |
N/V | 0.3881 | ambiguous | 0.3627 | ambiguous | -0.094 | Destabilizing | 0.939 | D | 0.401 | neutral | None | None | None | None | N |
N/W | 0.7499 | likely_pathogenic | 0.7296 | pathogenic | -0.726 | Destabilizing | 0.998 | D | 0.358 | neutral | None | None | None | None | N |
N/Y | 0.1817 | likely_benign | 0.1667 | benign | -0.458 | Destabilizing | 0.134 | N | 0.197 | neutral | N | 0.490094548 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.