Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19849 | 59770;59771;59772 | chr2:178592460;178592459;178592458 | chr2:179457187;179457186;179457185 |
N2AB | 18208 | 54847;54848;54849 | chr2:178592460;178592459;178592458 | chr2:179457187;179457186;179457185 |
N2A | 17281 | 52066;52067;52068 | chr2:178592460;178592459;178592458 | chr2:179457187;179457186;179457185 |
N2B | 10784 | 32575;32576;32577 | chr2:178592460;178592459;178592458 | chr2:179457187;179457186;179457185 |
Novex-1 | 10909 | 32950;32951;32952 | chr2:178592460;178592459;178592458 | chr2:179457187;179457186;179457185 |
Novex-2 | 10976 | 33151;33152;33153 | chr2:178592460;178592459;178592458 | chr2:179457187;179457186;179457185 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | 0.642 | N | 0.258 | 0.093 | 0.0954503805726 | gnomAD-4.0.0 | 1.5919E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77624E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4566 | ambiguous | 0.3165 | benign | 0.282 | Stabilizing | 0.495 | N | 0.32 | neutral | None | None | None | None | I |
H/C | 0.3013 | likely_benign | 0.2278 | benign | 0.674 | Stabilizing | 0.995 | D | 0.289 | neutral | None | None | None | None | I |
H/D | 0.5511 | ambiguous | 0.4306 | ambiguous | 0.064 | Stabilizing | 0.642 | D | 0.321 | neutral | N | 0.439180151 | None | None | I |
H/E | 0.4859 | ambiguous | 0.3761 | ambiguous | 0.075 | Stabilizing | 0.329 | N | 0.315 | neutral | None | None | None | None | I |
H/F | 0.4837 | ambiguous | 0.3861 | ambiguous | 0.799 | Stabilizing | 0.981 | D | 0.297 | neutral | None | None | None | None | I |
H/G | 0.5327 | ambiguous | 0.4139 | ambiguous | 0.024 | Stabilizing | 0.704 | D | 0.321 | neutral | None | None | None | None | I |
H/I | 0.5505 | ambiguous | 0.3924 | ambiguous | 0.929 | Stabilizing | 0.944 | D | 0.341 | neutral | None | None | None | None | I |
H/K | 0.2298 | likely_benign | 0.1972 | benign | 0.249 | Stabilizing | 0.003 | N | 0.157 | neutral | None | None | None | None | I |
H/L | 0.2164 | likely_benign | 0.1578 | benign | 0.929 | Stabilizing | 0.642 | D | 0.345 | neutral | N | 0.383420082 | None | None | I |
H/M | 0.6567 | likely_pathogenic | 0.5245 | ambiguous | 0.726 | Stabilizing | 0.981 | D | 0.291 | neutral | None | None | None | None | I |
H/N | 0.2922 | likely_benign | 0.2036 | benign | 0.295 | Stabilizing | 0.642 | D | 0.254 | neutral | N | 0.432619538 | None | None | I |
H/P | 0.2283 | likely_benign | 0.1786 | benign | 0.739 | Stabilizing | 0.927 | D | 0.341 | neutral | N | 0.373877879 | None | None | I |
H/Q | 0.2467 | likely_benign | 0.1863 | benign | 0.36 | Stabilizing | 0.642 | D | 0.258 | neutral | N | 0.406779731 | None | None | I |
H/R | 0.0753 | likely_benign | 0.0703 | benign | -0.253 | Destabilizing | 0.001 | N | 0.108 | neutral | N | 0.30592209 | None | None | I |
H/S | 0.4721 | ambiguous | 0.339 | benign | 0.347 | Stabilizing | 0.495 | N | 0.301 | neutral | None | None | None | None | I |
H/T | 0.5275 | ambiguous | 0.3708 | ambiguous | 0.455 | Stabilizing | 0.704 | D | 0.362 | neutral | None | None | None | None | I |
H/V | 0.4497 | ambiguous | 0.3184 | benign | 0.739 | Stabilizing | 0.828 | D | 0.352 | neutral | None | None | None | None | I |
H/W | 0.45 | ambiguous | 0.4133 | ambiguous | 0.755 | Stabilizing | 0.995 | D | 0.306 | neutral | None | None | None | None | I |
H/Y | 0.1688 | likely_benign | 0.134 | benign | 1.069 | Stabilizing | 0.917 | D | 0.295 | neutral | N | 0.424461415 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.