Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19854 | 59785;59786;59787 | chr2:178592445;178592444;178592443 | chr2:179457172;179457171;179457170 |
N2AB | 18213 | 54862;54863;54864 | chr2:178592445;178592444;178592443 | chr2:179457172;179457171;179457170 |
N2A | 17286 | 52081;52082;52083 | chr2:178592445;178592444;178592443 | chr2:179457172;179457171;179457170 |
N2B | 10789 | 32590;32591;32592 | chr2:178592445;178592444;178592443 | chr2:179457172;179457171;179457170 |
Novex-1 | 10914 | 32965;32966;32967 | chr2:178592445;178592444;178592443 | chr2:179457172;179457171;179457170 |
Novex-2 | 10981 | 33166;33167;33168 | chr2:178592445;178592444;178592443 | chr2:179457172;179457171;179457170 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1291718498 | -1.589 | 0.001 | N | 0.205 | 0.109 | 0.603063929177 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3422 | ambiguous | 0.2576 | benign | -1.632 | Destabilizing | 0.129 | N | 0.332 | neutral | None | None | None | None | N |
I/C | 0.586 | likely_pathogenic | 0.5001 | ambiguous | -1.093 | Destabilizing | 0.94 | D | 0.481 | neutral | None | None | None | None | N |
I/D | 0.5632 | ambiguous | 0.5216 | ambiguous | -0.482 | Destabilizing | 0.001 | N | 0.389 | neutral | None | None | None | None | N |
I/E | 0.5335 | ambiguous | 0.4808 | ambiguous | -0.432 | Destabilizing | 0.129 | N | 0.379 | neutral | None | None | None | None | N |
I/F | 0.1504 | likely_benign | 0.127 | benign | -1.007 | Destabilizing | 0.655 | D | 0.465 | neutral | N | 0.516820655 | None | None | N |
I/G | 0.6198 | likely_pathogenic | 0.5214 | ambiguous | -1.996 | Destabilizing | 0.129 | N | 0.419 | neutral | None | None | None | None | N |
I/H | 0.373 | ambiguous | 0.3187 | benign | -1.107 | Destabilizing | 0.716 | D | 0.541 | neutral | None | None | None | None | N |
I/K | 0.344 | ambiguous | 0.3127 | benign | -0.893 | Destabilizing | 0.129 | N | 0.471 | neutral | None | None | None | None | N |
I/L | 0.1114 | likely_benign | 0.0935 | benign | -0.693 | Destabilizing | 0.017 | N | 0.267 | neutral | N | 0.463063528 | None | None | N |
I/M | 0.1119 | likely_benign | 0.0876 | benign | -0.64 | Destabilizing | 0.007 | N | 0.178 | neutral | N | 0.505872943 | None | None | N |
I/N | 0.1912 | likely_benign | 0.1438 | benign | -0.768 | Destabilizing | 0.002 | N | 0.373 | neutral | N | 0.44207218 | None | None | N |
I/P | 0.701 | likely_pathogenic | 0.6166 | pathogenic | -0.975 | Destabilizing | 0.593 | D | 0.553 | neutral | None | None | None | None | N |
I/Q | 0.3901 | ambiguous | 0.3263 | benign | -0.86 | Destabilizing | 0.027 | N | 0.361 | neutral | None | None | None | None | N |
I/R | 0.2748 | likely_benign | 0.2678 | benign | -0.436 | Destabilizing | 0.418 | N | 0.529 | neutral | None | None | None | None | N |
I/S | 0.2539 | likely_benign | 0.1939 | benign | -1.557 | Destabilizing | 0.101 | N | 0.363 | neutral | N | 0.477472833 | None | None | N |
I/T | 0.1862 | likely_benign | 0.1386 | benign | -1.377 | Destabilizing | 0.001 | N | 0.205 | neutral | N | 0.448286077 | None | None | N |
I/V | 0.0855 | likely_benign | 0.074 | benign | -0.975 | Destabilizing | 0.047 | N | 0.287 | neutral | N | 0.460657941 | None | None | N |
I/W | 0.6255 | likely_pathogenic | 0.5893 | pathogenic | -1.051 | Destabilizing | 0.983 | D | 0.552 | neutral | None | None | None | None | N |
I/Y | 0.3574 | ambiguous | 0.3231 | benign | -0.814 | Destabilizing | 0.836 | D | 0.527 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.