Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19855 | 59788;59789;59790 | chr2:178592442;178592441;178592440 | chr2:179457169;179457168;179457167 |
N2AB | 18214 | 54865;54866;54867 | chr2:178592442;178592441;178592440 | chr2:179457169;179457168;179457167 |
N2A | 17287 | 52084;52085;52086 | chr2:178592442;178592441;178592440 | chr2:179457169;179457168;179457167 |
N2B | 10790 | 32593;32594;32595 | chr2:178592442;178592441;178592440 | chr2:179457169;179457168;179457167 |
Novex-1 | 10915 | 32968;32969;32970 | chr2:178592442;178592441;178592440 | chr2:179457169;179457168;179457167 |
Novex-2 | 10982 | 33169;33170;33171 | chr2:178592442;178592441;178592440 | chr2:179457169;179457168;179457167 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/N | rs779395388 | -3.275 | 1.0 | D | 0.887 | 0.877 | 0.886385070211 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
Y/N | rs779395388 | -3.275 | 1.0 | D | 0.887 | 0.877 | 0.886385070211 | gnomAD-4.0.0 | 6.36787E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57839E-06 | 0 | 3.02499E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9979 | likely_pathogenic | 0.9984 | pathogenic | -2.986 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/C | 0.9573 | likely_pathogenic | 0.9654 | pathogenic | -2.197 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.645529798 | None | None | N |
Y/D | 0.9982 | likely_pathogenic | 0.9987 | pathogenic | -3.428 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.645529798 | None | None | N |
Y/E | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -3.183 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/F | 0.1825 | likely_benign | 0.1649 | benign | -1.137 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | D | 0.577607354 | None | None | N |
Y/G | 0.996 | likely_pathogenic | 0.9969 | pathogenic | -3.454 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/H | 0.9722 | likely_pathogenic | 0.9785 | pathogenic | -2.387 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | D | 0.645327993 | None | None | N |
Y/I | 0.957 | likely_pathogenic | 0.9625 | pathogenic | -1.428 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Y/K | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | -2.41 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/L | 0.9221 | likely_pathogenic | 0.9227 | pathogenic | -1.428 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
Y/M | 0.9897 | likely_pathogenic | 0.9901 | pathogenic | -1.412 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Y/N | 0.9933 | likely_pathogenic | 0.9949 | pathogenic | -3.333 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.645529798 | None | None | N |
Y/P | 0.9984 | likely_pathogenic | 0.999 | pathogenic | -1.965 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Y/Q | 0.999 | likely_pathogenic | 0.9993 | pathogenic | -2.942 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Y/R | 0.9957 | likely_pathogenic | 0.997 | pathogenic | -2.402 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/S | 0.9922 | likely_pathogenic | 0.9943 | pathogenic | -3.707 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.645529798 | None | None | N |
Y/T | 0.9967 | likely_pathogenic | 0.9977 | pathogenic | -3.318 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/V | 0.9539 | likely_pathogenic | 0.9593 | pathogenic | -1.965 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
Y/W | 0.6865 | likely_pathogenic | 0.7107 | pathogenic | -0.434 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.