Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19859 | 59800;59801;59802 | chr2:178592430;178592429;178592428 | chr2:179457157;179457156;179457155 |
N2AB | 18218 | 54877;54878;54879 | chr2:178592430;178592429;178592428 | chr2:179457157;179457156;179457155 |
N2A | 17291 | 52096;52097;52098 | chr2:178592430;178592429;178592428 | chr2:179457157;179457156;179457155 |
N2B | 10794 | 32605;32606;32607 | chr2:178592430;178592429;178592428 | chr2:179457157;179457156;179457155 |
Novex-1 | 10919 | 32980;32981;32982 | chr2:178592430;178592429;178592428 | chr2:179457157;179457156;179457155 |
Novex-2 | 10986 | 33181;33182;33183 | chr2:178592430;178592429;178592428 | chr2:179457157;179457156;179457155 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs778885421 | -1.65 | 0.999 | N | 0.742 | 0.582 | 0.636570122401 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 1.78E-05 | 0 |
V/M | rs778885421 | -1.65 | 0.999 | N | 0.742 | 0.582 | 0.636570122401 | gnomAD-4.0.0 | 3.42179E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.00918E-04 | None | 0 | 0 | 8.99604E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2841 | likely_benign | 0.3221 | benign | -1.731 | Destabilizing | 0.543 | D | 0.337 | neutral | N | 0.432828261 | None | None | N |
V/C | 0.8982 | likely_pathogenic | 0.905 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
V/D | 0.9964 | likely_pathogenic | 0.9978 | pathogenic | -2.011 | Highly Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
V/E | 0.9898 | likely_pathogenic | 0.9932 | pathogenic | -1.962 | Destabilizing | 0.998 | D | 0.832 | deleterious | D | 0.5316228 | None | None | N |
V/F | 0.9137 | likely_pathogenic | 0.9166 | pathogenic | -1.36 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/G | 0.7367 | likely_pathogenic | 0.8094 | pathogenic | -2.093 | Highly Destabilizing | 0.997 | D | 0.79 | deleterious | D | 0.534854629 | None | None | N |
V/H | 0.9984 | likely_pathogenic | 0.9988 | pathogenic | -1.645 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/I | 0.126 | likely_benign | 0.1081 | benign | -0.808 | Destabilizing | 0.99 | D | 0.561 | neutral | None | None | None | None | N |
V/K | 0.9951 | likely_pathogenic | 0.997 | pathogenic | -1.389 | Destabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | N |
V/L | 0.485 | ambiguous | 0.4837 | ambiguous | -0.808 | Destabilizing | 0.973 | D | 0.629 | neutral | N | 0.485772603 | None | None | N |
V/M | 0.5732 | likely_pathogenic | 0.5778 | pathogenic | -0.845 | Destabilizing | 0.999 | D | 0.742 | deleterious | N | 0.508492116 | None | None | N |
V/N | 0.9901 | likely_pathogenic | 0.9928 | pathogenic | -1.374 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/P | 0.9937 | likely_pathogenic | 0.9966 | pathogenic | -1.083 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
V/Q | 0.9894 | likely_pathogenic | 0.993 | pathogenic | -1.518 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/R | 0.9898 | likely_pathogenic | 0.9936 | pathogenic | -0.947 | Destabilizing | 0.999 | D | 0.86 | deleterious | None | None | None | None | N |
V/S | 0.8475 | likely_pathogenic | 0.8776 | pathogenic | -1.941 | Destabilizing | 0.995 | D | 0.794 | deleterious | None | None | None | None | N |
V/T | 0.6222 | likely_pathogenic | 0.6435 | pathogenic | -1.773 | Destabilizing | 0.992 | D | 0.65 | neutral | None | None | None | None | N |
V/W | 0.999 | likely_pathogenic | 0.9993 | pathogenic | -1.593 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/Y | 0.995 | likely_pathogenic | 0.9962 | pathogenic | -1.266 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.