Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19863 | 59812;59813;59814 | chr2:178592418;178592417;178592416 | chr2:179457145;179457144;179457143 |
N2AB | 18222 | 54889;54890;54891 | chr2:178592418;178592417;178592416 | chr2:179457145;179457144;179457143 |
N2A | 17295 | 52108;52109;52110 | chr2:178592418;178592417;178592416 | chr2:179457145;179457144;179457143 |
N2B | 10798 | 32617;32618;32619 | chr2:178592418;178592417;178592416 | chr2:179457145;179457144;179457143 |
Novex-1 | 10923 | 32992;32993;32994 | chr2:178592418;178592417;178592416 | chr2:179457145;179457144;179457143 |
Novex-2 | 10990 | 33193;33194;33195 | chr2:178592418;178592417;178592416 | chr2:179457145;179457144;179457143 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | rs1416865059 | -0.243 | 1.0 | D | 0.801 | 0.568 | 0.619908932184 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
A/D | rs1416865059 | -0.243 | 1.0 | D | 0.801 | 0.568 | 0.619908932184 | gnomAD-4.0.0 | 1.59233E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43488E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5161 | ambiguous | 0.5197 | ambiguous | -0.888 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
A/D | 0.8449 | likely_pathogenic | 0.8605 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.531490534 | None | None | I |
A/E | 0.7517 | likely_pathogenic | 0.7734 | pathogenic | -0.676 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
A/F | 0.6164 | likely_pathogenic | 0.6095 | pathogenic | -0.977 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
A/G | 0.3156 | likely_benign | 0.2962 | benign | -0.288 | Destabilizing | 1.0 | D | 0.602 | neutral | D | 0.529365878 | None | None | I |
A/H | 0.7815 | likely_pathogenic | 0.8147 | pathogenic | -0.271 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
A/I | 0.4564 | ambiguous | 0.4421 | ambiguous | -0.493 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
A/K | 0.8793 | likely_pathogenic | 0.9034 | pathogenic | -0.55 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
A/L | 0.4684 | ambiguous | 0.4789 | ambiguous | -0.493 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
A/M | 0.4626 | ambiguous | 0.4628 | ambiguous | -0.634 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
A/N | 0.7119 | likely_pathogenic | 0.7143 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
A/P | 0.9463 | likely_pathogenic | 0.9524 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.748 | deleterious | D | 0.543011424 | None | None | I |
A/Q | 0.7072 | likely_pathogenic | 0.7501 | pathogenic | -0.517 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
A/R | 0.8054 | likely_pathogenic | 0.8445 | pathogenic | -0.147 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
A/S | 0.1434 | likely_benign | 0.1339 | benign | -0.467 | Destabilizing | 1.0 | D | 0.636 | neutral | D | 0.530365956 | None | None | I |
A/T | 0.2431 | likely_benign | 0.2364 | benign | -0.539 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.510255499 | None | None | I |
A/V | 0.1989 | likely_benign | 0.1855 | benign | -0.404 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | N | 0.511201405 | None | None | I |
A/W | 0.9427 | likely_pathogenic | 0.9514 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
A/Y | 0.7794 | likely_pathogenic | 0.8025 | pathogenic | -0.764 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.