Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19865 | 59818;59819;59820 | chr2:178592412;178592411;178592410 | chr2:179457139;179457138;179457137 |
N2AB | 18224 | 54895;54896;54897 | chr2:178592412;178592411;178592410 | chr2:179457139;179457138;179457137 |
N2A | 17297 | 52114;52115;52116 | chr2:178592412;178592411;178592410 | chr2:179457139;179457138;179457137 |
N2B | 10800 | 32623;32624;32625 | chr2:178592412;178592411;178592410 | chr2:179457139;179457138;179457137 |
Novex-1 | 10925 | 32998;32999;33000 | chr2:178592412;178592411;178592410 | chr2:179457139;179457138;179457137 |
Novex-2 | 10992 | 33199;33200;33201 | chr2:178592412;178592411;178592410 | chr2:179457139;179457138;179457137 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.124 | N | 0.607 | 0.343 | 0.391156786388 | gnomAD-4.0.0 | 1.59307E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02645E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0934 | likely_benign | 0.0864 | benign | -0.305 | Destabilizing | 0.055 | N | 0.421 | neutral | N | 0.494860269 | None | None | I |
S/C | 0.0838 | likely_benign | 0.0755 | benign | -0.247 | Destabilizing | 0.909 | D | 0.593 | neutral | None | None | None | None | I |
S/D | 0.5155 | ambiguous | 0.5316 | ambiguous | 0.034 | Stabilizing | 0.272 | N | 0.471 | neutral | None | None | None | None | I |
S/E | 0.4012 | ambiguous | 0.4432 | ambiguous | -0.073 | Destabilizing | 0.272 | N | 0.439 | neutral | None | None | None | None | I |
S/F | 0.2088 | likely_benign | 0.1971 | benign | -0.97 | Destabilizing | 0.726 | D | 0.673 | neutral | None | None | None | None | I |
S/G | 0.1225 | likely_benign | 0.1342 | benign | -0.388 | Destabilizing | 0.272 | N | 0.442 | neutral | None | None | None | None | I |
S/H | 0.2675 | likely_benign | 0.2751 | benign | -0.922 | Destabilizing | 0.968 | D | 0.565 | neutral | None | None | None | None | I |
S/I | 0.15 | likely_benign | 0.1366 | benign | -0.218 | Destabilizing | 0.396 | N | 0.66 | neutral | None | None | None | None | I |
S/K | 0.3831 | ambiguous | 0.3922 | ambiguous | -0.444 | Destabilizing | 0.005 | N | 0.225 | neutral | None | None | None | None | I |
S/L | 0.107 | likely_benign | 0.104 | benign | -0.218 | Destabilizing | 0.124 | N | 0.607 | neutral | N | 0.501243052 | None | None | I |
S/M | 0.1561 | likely_benign | 0.1469 | benign | 0.046 | Stabilizing | 0.909 | D | 0.568 | neutral | None | None | None | None | I |
S/N | 0.1354 | likely_benign | 0.1352 | benign | -0.157 | Destabilizing | 0.272 | N | 0.513 | neutral | None | None | None | None | I |
S/P | 0.7397 | likely_pathogenic | 0.8147 | pathogenic | -0.22 | Destabilizing | 0.667 | D | 0.555 | neutral | N | 0.513017431 | None | None | I |
S/Q | 0.3051 | likely_benign | 0.3191 | benign | -0.436 | Destabilizing | 0.567 | D | 0.499 | neutral | None | None | None | None | I |
S/R | 0.3388 | likely_benign | 0.3475 | ambiguous | -0.226 | Destabilizing | 0.396 | N | 0.509 | neutral | None | None | None | None | I |
S/T | 0.0685 | likely_benign | 0.0659 | benign | -0.259 | Destabilizing | 0.001 | N | 0.209 | neutral | N | 0.520957039 | None | None | I |
S/V | 0.1518 | likely_benign | 0.1403 | benign | -0.22 | Destabilizing | 0.157 | N | 0.581 | neutral | None | None | None | None | I |
S/W | 0.3644 | ambiguous | 0.3923 | ambiguous | -0.993 | Destabilizing | 0.968 | D | 0.71 | prob.delet. | None | None | None | None | I |
S/Y | 0.2102 | likely_benign | 0.2093 | benign | -0.704 | Destabilizing | 0.726 | D | 0.671 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.