Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19868 | 59827;59828;59829 | chr2:178592403;178592402;178592401 | chr2:179457130;179457129;179457128 |
N2AB | 18227 | 54904;54905;54906 | chr2:178592403;178592402;178592401 | chr2:179457130;179457129;179457128 |
N2A | 17300 | 52123;52124;52125 | chr2:178592403;178592402;178592401 | chr2:179457130;179457129;179457128 |
N2B | 10803 | 32632;32633;32634 | chr2:178592403;178592402;178592401 | chr2:179457130;179457129;179457128 |
Novex-1 | 10928 | 33007;33008;33009 | chr2:178592403;178592402;178592401 | chr2:179457130;179457129;179457128 |
Novex-2 | 10995 | 33208;33209;33210 | chr2:178592403;178592402;178592401 | chr2:179457130;179457129;179457128 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.954 | N | 0.638 | 0.279 | 0.604005332458 | gnomAD-4.0.0 | 6.84559E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99651E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3397 | likely_benign | 0.3005 | benign | -0.654 | Destabilizing | 0.044 | N | 0.271 | neutral | N | 0.401222849 | None | None | N |
V/C | 0.8603 | likely_pathogenic | 0.8645 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
V/D | 0.9371 | likely_pathogenic | 0.9344 | pathogenic | -0.111 | Destabilizing | 0.994 | D | 0.832 | deleterious | D | 0.532019394 | None | None | N |
V/E | 0.8757 | likely_pathogenic | 0.8813 | pathogenic | -0.193 | Destabilizing | 0.996 | D | 0.801 | deleterious | None | None | None | None | N |
V/F | 0.4853 | ambiguous | 0.4841 | ambiguous | -0.747 | Destabilizing | 0.998 | D | 0.804 | deleterious | D | 0.52563214 | None | None | N |
V/G | 0.6411 | likely_pathogenic | 0.6459 | pathogenic | -0.838 | Destabilizing | 0.925 | D | 0.775 | deleterious | N | 0.510009326 | None | None | N |
V/H | 0.9437 | likely_pathogenic | 0.9488 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
V/I | 0.1244 | likely_benign | 0.1161 | benign | -0.304 | Destabilizing | 0.954 | D | 0.638 | neutral | N | 0.483708159 | None | None | N |
V/K | 0.8902 | likely_pathogenic | 0.8994 | pathogenic | -0.465 | Destabilizing | 0.991 | D | 0.807 | deleterious | None | None | None | None | N |
V/L | 0.5127 | ambiguous | 0.5169 | ambiguous | -0.304 | Destabilizing | 0.91 | D | 0.628 | neutral | N | 0.506430303 | None | None | N |
V/M | 0.4076 | ambiguous | 0.3869 | ambiguous | -0.368 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/N | 0.8734 | likely_pathogenic | 0.8615 | pathogenic | -0.223 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
V/P | 0.9885 | likely_pathogenic | 0.9918 | pathogenic | -0.384 | Destabilizing | 0.996 | D | 0.799 | deleterious | None | None | None | None | N |
V/Q | 0.8443 | likely_pathogenic | 0.85 | pathogenic | -0.419 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
V/R | 0.8491 | likely_pathogenic | 0.8683 | pathogenic | -0.006 | Destabilizing | 0.996 | D | 0.848 | deleterious | None | None | None | None | N |
V/S | 0.6545 | likely_pathogenic | 0.6284 | pathogenic | -0.693 | Destabilizing | 0.942 | D | 0.744 | deleterious | None | None | None | None | N |
V/T | 0.485 | ambiguous | 0.4608 | ambiguous | -0.658 | Destabilizing | 0.97 | D | 0.669 | neutral | None | None | None | None | N |
V/W | 0.9766 | likely_pathogenic | 0.9806 | pathogenic | -0.822 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
V/Y | 0.87 | likely_pathogenic | 0.8851 | pathogenic | -0.515 | Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.