Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19870 | 59833;59834;59835 | chr2:178592397;178592396;178592395 | chr2:179457124;179457123;179457122 |
N2AB | 18229 | 54910;54911;54912 | chr2:178592397;178592396;178592395 | chr2:179457124;179457123;179457122 |
N2A | 17302 | 52129;52130;52131 | chr2:178592397;178592396;178592395 | chr2:179457124;179457123;179457122 |
N2B | 10805 | 32638;32639;32640 | chr2:178592397;178592396;178592395 | chr2:179457124;179457123;179457122 |
Novex-1 | 10930 | 33013;33014;33015 | chr2:178592397;178592396;178592395 | chr2:179457124;179457123;179457122 |
Novex-2 | 10997 | 33214;33215;33216 | chr2:178592397;178592396;178592395 | chr2:179457124;179457123;179457122 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.994 | N | 0.81 | 0.523 | 0.83695693211 | gnomAD-4.0.0 | 1.59326E-06 | None | None | None | None | N | None | 5.67795E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7175 | likely_pathogenic | 0.67 | pathogenic | -2.04 | Highly Destabilizing | 0.91 | D | 0.585 | neutral | N | 0.492690215 | None | None | N |
V/C | 0.8439 | likely_pathogenic | 0.792 | pathogenic | -1.748 | Destabilizing | 0.092 | N | 0.419 | neutral | None | None | None | None | N |
V/D | 0.9916 | likely_pathogenic | 0.9928 | pathogenic | -2.572 | Highly Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
V/E | 0.9791 | likely_pathogenic | 0.9838 | pathogenic | -2.371 | Highly Destabilizing | 0.998 | D | 0.791 | deleterious | N | 0.520387718 | None | None | N |
V/F | 0.583 | likely_pathogenic | 0.5681 | pathogenic | -1.238 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
V/G | 0.8159 | likely_pathogenic | 0.8248 | pathogenic | -2.567 | Highly Destabilizing | 0.994 | D | 0.81 | deleterious | N | 0.497675107 | None | None | N |
V/H | 0.9867 | likely_pathogenic | 0.9882 | pathogenic | -2.32 | Highly Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
V/I | 0.1173 | likely_benign | 0.1053 | benign | -0.583 | Destabilizing | 0.954 | D | 0.639 | neutral | N | 0.49940833 | None | None | N |
V/K | 0.9746 | likely_pathogenic | 0.982 | pathogenic | -1.688 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
V/L | 0.5893 | likely_pathogenic | 0.5479 | ambiguous | -0.583 | Destabilizing | 0.91 | D | 0.577 | neutral | N | 0.512566842 | None | None | N |
V/M | 0.5171 | ambiguous | 0.4601 | ambiguous | -0.72 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
V/N | 0.9609 | likely_pathogenic | 0.961 | pathogenic | -1.977 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
V/P | 0.9913 | likely_pathogenic | 0.9935 | pathogenic | -1.04 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
V/Q | 0.9578 | likely_pathogenic | 0.9683 | pathogenic | -1.843 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
V/R | 0.9536 | likely_pathogenic | 0.9695 | pathogenic | -1.513 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
V/S | 0.8793 | likely_pathogenic | 0.867 | pathogenic | -2.612 | Highly Destabilizing | 0.985 | D | 0.785 | deleterious | None | None | None | None | N |
V/T | 0.6901 | likely_pathogenic | 0.629 | pathogenic | -2.267 | Highly Destabilizing | 0.985 | D | 0.665 | neutral | None | None | None | None | N |
V/W | 0.9886 | likely_pathogenic | 0.9896 | pathogenic | -1.733 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
V/Y | 0.9558 | likely_pathogenic | 0.9582 | pathogenic | -1.354 | Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.