Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19879 | 59860;59861;59862 | chr2:178592269;178592268;178592267 | chr2:179456996;179456995;179456994 |
N2AB | 18238 | 54937;54938;54939 | chr2:178592269;178592268;178592267 | chr2:179456996;179456995;179456994 |
N2A | 17311 | 52156;52157;52158 | chr2:178592269;178592268;178592267 | chr2:179456996;179456995;179456994 |
N2B | 10814 | 32665;32666;32667 | chr2:178592269;178592268;178592267 | chr2:179456996;179456995;179456994 |
Novex-1 | 10939 | 33040;33041;33042 | chr2:178592269;178592268;178592267 | chr2:179456996;179456995;179456994 |
Novex-2 | 11006 | 33241;33242;33243 | chr2:178592269;178592268;178592267 | chr2:179456996;179456995;179456994 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs745418262 | -2.125 | 1.0 | N | 0.866 | 0.362 | 0.43656330218 | gnomAD-2.1.1 | 1.24E-05 | None | None | None | None | N | None | 0 | 8.95E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/E | rs745418262 | -2.125 | 1.0 | N | 0.866 | 0.362 | 0.43656330218 | gnomAD-4.0.0 | 4.80383E-06 | None | None | None | None | N | None | 0 | 6.97869E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2668 | likely_benign | 0.2879 | benign | -0.898 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.493396606 | None | None | N |
G/C | 0.508 | ambiguous | 0.5804 | pathogenic | -1.13 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
G/D | 0.6969 | likely_pathogenic | 0.7473 | pathogenic | -2.171 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
G/E | 0.7176 | likely_pathogenic | 0.7693 | pathogenic | -2.213 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | N | 0.492382648 | None | None | N |
G/F | 0.8549 | likely_pathogenic | 0.8968 | pathogenic | -1.216 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
G/H | 0.8256 | likely_pathogenic | 0.8789 | pathogenic | -1.569 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
G/I | 0.8024 | likely_pathogenic | 0.8625 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
G/K | 0.8619 | likely_pathogenic | 0.8992 | pathogenic | -1.501 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
G/L | 0.6852 | likely_pathogenic | 0.734 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
G/M | 0.7908 | likely_pathogenic | 0.8381 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
G/N | 0.6489 | likely_pathogenic | 0.7088 | pathogenic | -1.28 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
G/P | 0.9854 | likely_pathogenic | 0.9901 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
G/Q | 0.7434 | likely_pathogenic | 0.8003 | pathogenic | -1.493 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
G/R | 0.7796 | likely_pathogenic | 0.8411 | pathogenic | -1.151 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.50525989 | None | None | N |
G/S | 0.1764 | likely_benign | 0.2016 | benign | -1.419 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
G/T | 0.4751 | ambiguous | 0.5719 | pathogenic | -1.405 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
G/V | 0.7022 | likely_pathogenic | 0.7833 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.873 | deleterious | N | 0.494917543 | None | None | N |
G/W | 0.8356 | likely_pathogenic | 0.8843 | pathogenic | -1.629 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.518048227 | None | None | N |
G/Y | 0.8004 | likely_pathogenic | 0.8568 | pathogenic | -1.232 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.