Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19881 | 59866;59867;59868 | chr2:178592263;178592262;178592261 | chr2:179456990;179456989;179456988 |
N2AB | 18240 | 54943;54944;54945 | chr2:178592263;178592262;178592261 | chr2:179456990;179456989;179456988 |
N2A | 17313 | 52162;52163;52164 | chr2:178592263;178592262;178592261 | chr2:179456990;179456989;179456988 |
N2B | 10816 | 32671;32672;32673 | chr2:178592263;178592262;178592261 | chr2:179456990;179456989;179456988 |
Novex-1 | 10941 | 33046;33047;33048 | chr2:178592263;178592262;178592261 | chr2:179456990;179456989;179456988 |
Novex-2 | 11008 | 33247;33248;33249 | chr2:178592263;178592262;178592261 | chr2:179456990;179456989;179456988 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | rs749276384 | -2.69 | 0.999 | D | 0.866 | 0.616 | 0.725244559022 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.32E-05 | None | 0 | 0 | 0 |
P/H | rs749276384 | -2.69 | 0.999 | D | 0.866 | 0.616 | 0.725244559022 | gnomAD-4.0.0 | 6.85353E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16602E-05 | 0 |
P/R | None | None | 0.996 | D | 0.857 | 0.621 | 0.72322085207 | gnomAD-4.0.0 | 1.37071E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80028E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5271 | ambiguous | 0.5462 | ambiguous | -2.342 | Highly Destabilizing | 0.826 | D | 0.767 | deleterious | D | 0.574224889 | None | None | N |
P/C | 0.7615 | likely_pathogenic | 0.8144 | pathogenic | -1.871 | Destabilizing | 0.999 | D | 0.88 | deleterious | None | None | None | None | N |
P/D | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -3.358 | Highly Destabilizing | 0.997 | D | 0.829 | deleterious | None | None | None | None | N |
P/E | 0.9957 | likely_pathogenic | 0.9968 | pathogenic | -3.079 | Highly Destabilizing | 0.997 | D | 0.841 | deleterious | None | None | None | None | N |
P/F | 0.9957 | likely_pathogenic | 0.9963 | pathogenic | -1.182 | Destabilizing | 0.991 | D | 0.874 | deleterious | None | None | None | None | N |
P/G | 0.9842 | likely_pathogenic | 0.9867 | pathogenic | -2.891 | Highly Destabilizing | 0.99 | D | 0.844 | deleterious | None | None | None | None | N |
P/H | 0.9954 | likely_pathogenic | 0.9963 | pathogenic | -2.727 | Highly Destabilizing | 0.999 | D | 0.866 | deleterious | D | 0.6326393 | None | None | N |
P/I | 0.5318 | ambiguous | 0.5839 | pathogenic | -0.752 | Destabilizing | 0.079 | N | 0.667 | neutral | None | None | None | None | N |
P/K | 0.9978 | likely_pathogenic | 0.9983 | pathogenic | -1.93 | Destabilizing | 0.997 | D | 0.838 | deleterious | None | None | None | None | N |
P/L | 0.6846 | likely_pathogenic | 0.714 | pathogenic | -0.752 | Destabilizing | 0.704 | D | 0.806 | deleterious | D | 0.599964805 | None | None | N |
P/M | 0.9247 | likely_pathogenic | 0.9373 | pathogenic | -1.047 | Destabilizing | 0.991 | D | 0.868 | deleterious | None | None | None | None | N |
P/N | 0.9967 | likely_pathogenic | 0.9977 | pathogenic | -2.473 | Highly Destabilizing | 0.997 | D | 0.855 | deleterious | None | None | None | None | N |
P/Q | 0.9898 | likely_pathogenic | 0.9921 | pathogenic | -2.185 | Highly Destabilizing | 0.997 | D | 0.812 | deleterious | None | None | None | None | N |
P/R | 0.9931 | likely_pathogenic | 0.9946 | pathogenic | -1.897 | Destabilizing | 0.996 | D | 0.857 | deleterious | D | 0.632437496 | None | None | N |
P/S | 0.9464 | likely_pathogenic | 0.9557 | pathogenic | -2.964 | Highly Destabilizing | 0.959 | D | 0.827 | deleterious | D | 0.599964805 | None | None | N |
P/T | 0.8092 | likely_pathogenic | 0.8325 | pathogenic | -2.553 | Highly Destabilizing | 0.92 | D | 0.786 | deleterious | D | 0.590880023 | None | None | N |
P/V | 0.2826 | likely_benign | 0.3105 | benign | -1.264 | Destabilizing | 0.17 | N | 0.641 | neutral | None | None | None | None | N |
P/W | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -1.805 | Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
P/Y | 0.9985 | likely_pathogenic | 0.9988 | pathogenic | -1.505 | Destabilizing | 0.997 | D | 0.876 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.