Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 19883 | 59872;59873;59874 | chr2:178592257;178592256;178592255 | chr2:179456984;179456983;179456982 |
N2AB | 18242 | 54949;54950;54951 | chr2:178592257;178592256;178592255 | chr2:179456984;179456983;179456982 |
N2A | 17315 | 52168;52169;52170 | chr2:178592257;178592256;178592255 | chr2:179456984;179456983;179456982 |
N2B | 10818 | 32677;32678;32679 | chr2:178592257;178592256;178592255 | chr2:179456984;179456983;179456982 |
Novex-1 | 10943 | 33052;33053;33054 | chr2:178592257;178592256;178592255 | chr2:179456984;179456983;179456982 |
Novex-2 | 11010 | 33253;33254;33255 | chr2:178592257;178592256;178592255 | chr2:179456984;179456983;179456982 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs1060500395 | None | 0.934 | N | 0.461 | 0.377 | None | gnomAD-4.0.0 | 1.0963E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.35016E-05 | 0 | 1.6592E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.171 | likely_benign | 0.1666 | benign | -0.395 | Destabilizing | 0.801 | D | 0.364 | neutral | N | 0.473786662 | None | None | N |
D/C | 0.5147 | ambiguous | 0.5192 | ambiguous | -0.149 | Destabilizing | 0.998 | D | 0.524 | neutral | None | None | None | None | N |
D/E | 0.1709 | likely_benign | 0.1583 | benign | -0.472 | Destabilizing | 0.625 | D | 0.368 | neutral | N | 0.498394318 | None | None | N |
D/F | 0.4626 | ambiguous | 0.4465 | ambiguous | -0.224 | Destabilizing | 0.974 | D | 0.458 | neutral | None | None | None | None | N |
D/G | 0.1405 | likely_benign | 0.1497 | benign | -0.63 | Destabilizing | 0.669 | D | 0.334 | neutral | N | 0.479576484 | None | None | N |
D/H | 0.2255 | likely_benign | 0.2412 | benign | -0.179 | Destabilizing | 0.012 | N | 0.193 | neutral | N | 0.464052458 | None | None | N |
D/I | 0.4259 | ambiguous | 0.4227 | ambiguous | 0.188 | Stabilizing | 0.974 | D | 0.465 | neutral | None | None | None | None | N |
D/K | 0.4203 | ambiguous | 0.432 | ambiguous | 0.015 | Stabilizing | 0.842 | D | 0.367 | neutral | None | None | None | None | N |
D/L | 0.3464 | ambiguous | 0.3355 | benign | 0.188 | Stabilizing | 0.974 | D | 0.408 | neutral | None | None | None | None | N |
D/M | 0.5472 | ambiguous | 0.535 | ambiguous | 0.334 | Stabilizing | 0.998 | D | 0.454 | neutral | None | None | None | None | N |
D/N | 0.0763 | likely_benign | 0.0795 | benign | -0.298 | Destabilizing | 0.005 | N | 0.073 | neutral | N | 0.409596324 | None | None | N |
D/P | 0.8223 | likely_pathogenic | 0.8611 | pathogenic | 0.017 | Stabilizing | 0.991 | D | 0.449 | neutral | None | None | None | None | N |
D/Q | 0.2827 | likely_benign | 0.2894 | benign | -0.259 | Destabilizing | 0.974 | D | 0.4 | neutral | None | None | None | None | N |
D/R | 0.4343 | ambiguous | 0.451 | ambiguous | 0.238 | Stabilizing | 0.949 | D | 0.398 | neutral | None | None | None | None | N |
D/S | 0.1314 | likely_benign | 0.135 | benign | -0.436 | Destabilizing | 0.728 | D | 0.32 | neutral | None | None | None | None | N |
D/T | 0.2972 | likely_benign | 0.3051 | benign | -0.258 | Destabilizing | 0.842 | D | 0.365 | neutral | None | None | None | None | N |
D/V | 0.2801 | likely_benign | 0.2739 | benign | 0.017 | Stabilizing | 0.966 | D | 0.441 | neutral | N | 0.501666697 | None | None | N |
D/W | 0.84 | likely_pathogenic | 0.8403 | pathogenic | -0.065 | Destabilizing | 0.998 | D | 0.62 | neutral | None | None | None | None | N |
D/Y | 0.1871 | likely_benign | 0.1831 | benign | 0.009 | Stabilizing | 0.934 | D | 0.461 | neutral | N | 0.495046128 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.